RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 SNCBQ16143 134 aa20.54■□□□□ 0.88
SIPA1-210ENST00000534406 CSNK2A3Q8NEV1 391 aa20.54■□□□□ 0.88
SIPA1-210ENST00000534406 GGHQ92820 318 aa20.54■□□□□ 0.88
SIPA1-210ENST00000534406 ZNF649Q9BS31 505 aa20.54■□□□□ 0.88
SIPA1-210ENST00000534406 ADAT1Q9BUB4 502 aaKnown RBP20.54■□□□□ 0.88
SIPA1-210ENST00000534406 PSORS1C1Q9UIG5 152 aa20.54■□□□□ 0.88
SIPA1-210ENST00000534406 EXOSC1Q9Y3B2 195 aaKnown RBP20.54■□□□□ 0.88
SIPA1-210ENST00000534406 TRIM64A6NGJ6 449 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 TRIM64BA6NI03 449 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 NDUFS8O00217 210 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 IGLV3-1P01715 115 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 LIMS3P0CW19 117 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 LIMS4P0CW20 117 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 PSMB10P40306 273 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 MED21Q13503 144 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 OR8G1Q15617 311 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 C6orf141Q5SZD1 244 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 EGFL6Q8IUX8 553 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 FTMTQ8N4E7 242 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 C10orf105Q8TEF2 133 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 PPP1R14AQ96A00 147 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 PELI1Q96FA3 418 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 TMEM80Q96HE8 168 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 FAM71F1Q96KD3 344 aaPredicted RBP20.53■□□□□ 0.88
SIPA1-210ENST00000534406 PIMREGQ9BSJ6 248 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 SLC22A13Q9Y226 551 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 TANC2Q9HCD6 1990 aa20.53■□□□□ 0.88
SIPA1-210ENST00000534406 IGHV4-30-2A0A087WSY4 118 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 IGHV1-69-2A0A0G2JMI3 117 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 LYNX1G3V0Z9 82 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 SLC1A7O00341 560 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 HLA-DPB1P04440 258 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 LYNX1P0DP58 116 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 ATP6V1B1P15313 513 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 ACHEP22303 614 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 CA6P23280 308 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 CSNK2BP67870 215 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 ST3GAL4Q11206 333 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 TNK1Q13470 666 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 WDR38Q5JTN6 314 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 AHSA2Q719I0 299 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 ITLN1Q8WWA0 313 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 ITFG2Q969R8 447 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 CNBD2Q96M20 576 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 OR2V2Q96R30 315 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 SOX7Q9BT81 388 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 CHCHD3Q9NX63 227 aaKnown RBP20.52■□□□□ 0.88
SIPA1-210ENST00000534406 IL19Q9UHD0 177 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 F8P00451 2351 aa20.52■□□□□ 0.88
SIPA1-210ENST00000534406 H0YL77 283 aa20.51■□□□□ 0.87
SIPA1-210ENST00000534406 CDC14BO60729 498 aa20.51■□□□□ 0.87
SIPA1-210ENST00000534406 HTR1AP08908 422 aa20.51■□□□□ 0.87
SIPA1-210ENST00000534406 SLC25A16P16260 332 aa20.51■□□□□ 0.87
SIPA1-210ENST00000534406 TNFRSF1AP19438 455 aa20.51■□□□□ 0.87
SIPA1-210ENST00000534406 ACKR3P25106 362 aa20.51■□□□□ 0.87
SIPA1-210ENST00000534406 MAP2K3P46734 347 aa20.51■□□□□ 0.87
SIPA1-210ENST00000534406 SRP9P49458 86 aaKnown RBP20.51■□□□□ 0.87
SIPA1-210ENST00000534406 ETV1P50549 477 aa20.51■□□□□ 0.87
SIPA1-210ENST00000534406 MRPL28Q13084 256 aaKnown RBP20.51■□□□□ 0.87
SIPA1-210ENST00000534406 FDX2Q6P4F2 183 aa20.51■□□□□ 0.87
SIPA1-210ENST00000534406 STX19Q8N4C7 294 aa20.51■□□□□ 0.87
SIPA1-210ENST00000534406 ZNF540Q8NDQ6 660 aa20.51■□□□□ 0.87
SIPA1-210ENST00000534406 OR2G2Q8NGZ5 317 aa20.51■□□□□ 0.87
SIPA1-210ENST00000534406 YIPF5Q969M3 257 aa20.51■□□□□ 0.87
SIPA1-210ENST00000534406 RNF166Q96A37 237 aaPredicted RBP20.51■□□□□ 0.87
SIPA1-210ENST00000534406 PAPOLGQ9BWT3 736 aaKnown RBP20.51■□□□□ 0.87
SIPA1-210ENST00000534406 Q9H521 79 aa20.51■□□□□ 0.87
SIPA1-210ENST00000534406 ISG20L2Q9H9L3 353 aaKnown RBP20.51■□□□□ 0.87
SIPA1-210ENST00000534406 CHODLQ9H9P2 273 aa20.51■□□□□ 0.87
SIPA1-210ENST00000534406 DLL4Q9NR61 685 aa20.51■□□□□ 0.87
SIPA1-210ENST00000534406 CAB39Q9Y376 341 aaPredicted RBP20.51■□□□□ 0.87
SIPA1-210ENST00000534406 HIVEP1P15822 2718 aa20.5■□□□□ 0.87
SIPA1-210ENST00000534406 F5H5P2 479 aa20.5■□□□□ 0.87
SIPA1-210ENST00000534406 P2RY10O00398 339 aa20.5■□□□□ 0.87
SIPA1-210ENST00000534406 GMDSO60547 372 aa20.5■□□□□ 0.87
SIPA1-210ENST00000534406 MTRF1O75570 445 aaKnown RBP20.5■□□□□ 0.87
SIPA1-210ENST00000534406 RP2O75695 350 aa20.5■□□□□ 0.87
SIPA1-210ENST00000534406 UBCP0CG48 685 aaKnown RBP20.5■□□□□ 0.87
SIPA1-210ENST00000534406 GNALP38405 381 aa20.5■□□□□ 0.87
SIPA1-210ENST00000534406 CRYBB2P43320 205 aa20.5■□□□□ 0.87
SIPA1-210ENST00000534406 KIR3DL2P43630 455 aa20.5■□□□□ 0.87
SIPA1-210ENST00000534406 TMPRSS11AQ6ZMR5 421 aa20.5■□□□□ 0.87
SIPA1-210ENST00000534406 KLBQ86Z14 1044 aa20.5■□□□□ 0.87
SIPA1-210ENST00000534406 PRSS35Q8N3Z0 413 aa20.5■□□□□ 0.87
SIPA1-210ENST00000534406 KLHL36Q8N4N3 616 aa20.5■□□□□ 0.87
SIPA1-210ENST00000534406 HAVCR2Q8TDQ0 301 aa20.5■□□□□ 0.87
SIPA1-210ENST00000534406 MEGF10Q96KG7 1140 aa20.5■□□□□ 0.87
SIPA1-210ENST00000534406 RASSF4Q9H2L5 321 aa20.5■□□□□ 0.87
SIPA1-210ENST00000534406 SCN3BQ9NY72 215 aa20.5■□□□□ 0.87
SIPA1-210ENST00000534406 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.49■□□□□ 0.87
SIPA1-210ENST00000534406 A0A1B0GVI7 797 aa20.49■□□□□ 0.87
SIPA1-210ENST00000534406 DHRS3O75911 302 aa20.49■□□□□ 0.87
SIPA1-210ENST00000534406 COL8A2P25067 703 aa20.49■□□□□ 0.87
SIPA1-210ENST00000534406 GIFP27352 417 aa20.49■□□□□ 0.87
SIPA1-210ENST00000534406 GBX2P52951 348 aaPredicted RBP20.49■□□□□ 0.87
SIPA1-210ENST00000534406 ODF4Q2M2E3 257 aa20.49■□□□□ 0.87
SIPA1-210ENST00000534406 SPRNQ5BIV9 151 aa20.49■□□□□ 0.87
SIPA1-210ENST00000534406 DOK3Q7L591 496 aa20.49■□□□□ 0.87
SIPA1-210ENST00000534406 SEMA6DQ8NFY4 1073 aa20.49■□□□□ 0.87
SIPA1-210ENST00000534406 DVL3Q92997 716 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms