RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 NEIL1Q96FI4 390 aaPredicted RBP12.99□□□□□ -0.33
UBXN1-217ENST00000534176 OR8B2Q96RD0 313 aa12.99□□□□□ -0.33
UBXN1-217ENST00000534176 CNN2Q99439 309 aaKnown RBP12.99□□□□□ -0.33
UBXN1-217ENST00000534176 MOB1AQ9H8S9 216 aa12.99□□□□□ -0.33
UBXN1-217ENST00000534176 ANK3Q12955 4377 aaKnown RBP12.98□□□□□ -0.33
UBXN1-217ENST00000534176 TRAV38-1A0A0B4J264 116 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 A0A0U1RQV5 110 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 hCG_38984A0A1B0GV85 526 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 CEACAM18A8MTB9 384 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 SELENOFO60613 162 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 PPIAL4GP0DN37 164 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 SLC2A1P11166 492 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 RPS2P15880 293 aaKnown RBP12.98□□□□□ -0.33
UBXN1-217ENST00000534176 OR8B8Q15620 311 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 SPRNQ5BIV9 151 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 TMEM236Q5W0B7 351 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 BTNL3Q6UXE8 466 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 IL17RELQ6ZVW7 336 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 FAM57BQ71RH2 274 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 SPATC1Q76KD6 591 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 ZNF679Q8IYX0 411 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 ZNF420Q8TAQ5 688 aaPredicted RBP12.98□□□□□ -0.33
UBXN1-217ENST00000534176 TRUB1Q8WWH5 349 aaKnown RBP12.98□□□□□ -0.33
UBXN1-217ENST00000534176 RFKQ969G6 155 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 SGK3Q96BR1 496 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 MICU1Q9BPX6 476 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 MRI1Q9BV20 369 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 SSBP3Q9BWW4 388 aaPredicted RBP12.98□□□□□ -0.33
UBXN1-217ENST00000534176 C7orf69Q9H7B7 122 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 RNPEPL1Q9HAU8 725 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 TMEM165Q9HC07 324 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 N6AMT1Q9Y5N5 214 aa12.98□□□□□ -0.33
UBXN1-217ENST00000534176 TMEM210A6NLX4 147 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 CYB5R3P00387 301 aaPredicted RBP12.97□□□□□ -0.33
UBXN1-217ENST00000534176 WNT2P09544 360 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 FPR2P25090 351 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 NAA10P41227 235 aaPredicted RBP12.97□□□□□ -0.33
UBXN1-217ENST00000534176 GSK3AP49840 483 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 RIDAP52758 137 aaKnown RBP12.97□□□□□ -0.33
UBXN1-217ENST00000534176 CDC42P60953 191 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 GNB2P62879 340 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 LCN2P80188 198 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 EFNB1P98172 346 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 EGR3Q06889 387 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 ZBTB37Q5TC79 503 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 CD276Q5ZPR3 534 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 C12orf73Q69YU5 71 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 LRRN1Q6UXK5 716 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 OR8J1Q8NGP2 316 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 LRTOMTQ8WZ04 291 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 RAB3IPQ96QF0 476 aaPredicted RBP12.97□□□□□ -0.33
UBXN1-217ENST00000534176 MYCBPQ99417 103 aaPredicted RBP12.97□□□□□ -0.33
UBXN1-217ENST00000534176 GABARAPL3Q9BY60 117 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 TMPRSS13Q9BYE2 586 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 METTL17Q9H7H0 456 aaPredicted RBP12.97□□□□□ -0.33
UBXN1-217ENST00000534176 DNAJC27Q9NZQ0 273 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 WARS2Q9UGM6 360 aaKnown RBP12.97□□□□□ -0.33
UBXN1-217ENST00000534176 OAZ3Q9UMX2 235 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 LRP12Q9Y561 859 aa12.97□□□□□ -0.33
UBXN1-217ENST00000534176 SVEP1Q4LDE5 3571 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 SNTNA6NMZ2 147 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 PRKYO43930 277 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 FAM20BO75063 409 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 MTRF1O75570 445 aaKnown RBP12.96□□□□□ -0.33
UBXN1-217ENST00000534176 CST4P01036 141 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 ADRA2CP18825 462 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 CFHR2P36980 270 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 MAP2K3P46734 347 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 AADACL4Q5VUY2 407 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 KRT74Q7RTS7 529 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 AMIGO2Q86SJ2 522 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 GALNT4Q8N4A0 578 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 TCEANCQ8N8B7 351 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 BBS1Q8NFJ9 593 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 HIST1H2AAQ96QV6 131 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 MDFIQ99750 246 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 CIB1Q99828 191 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 TMEM246Q9BRR3 403 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 RTL8AQ9BWD3 113 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 PAPOLGQ9BWT3 736 aaKnown RBP12.96□□□□□ -0.33
UBXN1-217ENST00000534176 SUCNR1Q9BXA5 334 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 CLN6Q9NWW5 311 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 DCAF16Q9NXF7 216 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 CLN8Q9UBY8 286 aa12.96□□□□□ -0.33
UBXN1-217ENST00000534176 COL6A5A8TX70 2615 aa12.95□□□□□ -0.34
UBXN1-217ENST00000534176 MXRA5Q9NR99 2828 aa12.95□□□□□ -0.34
UBXN1-217ENST00000534176 TMEM269A0A1B0GVZ9 245 aa12.95□□□□□ -0.34
UBXN1-217ENST00000534176 A6NLC8 198 aa12.95□□□□□ -0.34
UBXN1-217ENST00000534176 ZNF670-ZNF695F2Z2N8 137 aa12.95□□□□□ -0.34
UBXN1-217ENST00000534176 LGALS8O00214 317 aa12.95□□□□□ -0.34
UBXN1-217ENST00000534176 LIPFP07098 398 aa12.95□□□□□ -0.34
UBXN1-217ENST00000534176 ZNF12P17014 697 aa12.95□□□□□ -0.34
UBXN1-217ENST00000534176 EPHA1P21709 976 aa12.95□□□□□ -0.34
UBXN1-217ENST00000534176 PITPNBP48739 271 aa12.95□□□□□ -0.34
UBXN1-217ENST00000534176 ZNF154Q13106 437 aa12.95□□□□□ -0.34
UBXN1-217ENST00000534176 FAM81AQ8TBF8 368 aa12.95□□□□□ -0.34
UBXN1-217ENST00000534176 C12orf43Q96C57 262 aaKnown RBP12.95□□□□□ -0.34
UBXN1-217ENST00000534176 DMRTB1Q96MA1 342 aa12.95□□□□□ -0.34
UBXN1-217ENST00000534176 OR8B4Q96RC9 309 aa12.95□□□□□ -0.34
UBXN1-217ENST00000534176 AMELYQ99218 206 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms