RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 RIMS3Q9UJD0 308 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 IKZF2Q9UKS7 526 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 EXOGQ9Y2C4 368 aaKnown RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 WIF1Q9Y5W5 379 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 ZFHX2Q9C0A1 2572 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 USP24Q9UPU5 2620 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 SPEF2Q9C093 1822 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 AIPO00170 330 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 SIVA1O15304 175 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 EFNA2O43921 213 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 FAM189A1O60320 539 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 SCELO95171 688 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 SERPINE2P07093 398 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 SPNP16150 400 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF7P17097 686 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 NPR2P20594 1047 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 TBXA2RP21731 343 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 STOMP27105 288 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 CD1CP29017 333 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 BRCC3P46736 316 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 RAB5CP51148 216 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 OGDHQ02218 1023 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 PRKCDQ05655 676 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 TWF1Q12792 350 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 ORC2Q13416 577 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 AKIRIN2Q53H80 203 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 FBXW9Q5XUX1 488 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF470Q6ECI4 717 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF773Q6PK81 442 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 PTAR1Q7Z6K3 402 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 THOC6Q86W42 341 aaKnown RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 CATSPERDQ86XM0 798 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 FAM71AQ8IYT1 594 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 BPIFB6Q8NFQ5 453 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 OR5J2Q8NH18 312 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 FBXO25Q8TCJ0 367 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 FAF2Q96CS3 445 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 TIMD4Q96H15 378 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 GLT1D1Q96MS3 346 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 MCCC1Q96RQ3 725 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 MCRIP2Q9BUT9 160 aaKnown RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 NKX6-2Q9C056 277 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 NXF2Q9GZY0 626 aaKnown RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 WDR13Q9H1Z4 485 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 DSN1Q9H410 356 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 CSNK1G1Q9HCP0 422 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF71Q9NQZ8 489 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-210ENST00000534172 MS4A12Q9NXJ0 267 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 KLRF1Q9NZS2 232 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 ANAPC7Q9UJX3 599 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 OR52A1Q9UKL2 312 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 KPTNQ9Y664 436 aa2.94□□□□□ -1.94
CSMD3-210ENST00000534172 MYH8P13535 1937 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 FASNP49327 2511 aaKnown RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 A0A0A6YYD4 124 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 A0A1B0GV72 72 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 M0R3G1 203 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 OR7A17O14581 309 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 CASKO14936 926 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 PIAS1O75925 651 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 VAMP5O95183 116 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 IFNA17P01571 189 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 NBEAP1P0C6P0 100 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 UBCP0CG48 685 aaKnown RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 HIST1H1BP16401 226 aaKnown RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 EDNRAP25101 427 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 NAA10P41227 235 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 CRYBB2P43320 205 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 P2RY1P47900 373 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 KCNJ3P48549 501 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 TGM4P49221 684 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 PGFP49763 221 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 SNRPD1P62314 119 aaKnown RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 SLC9A3R2Q15599 337 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 C5orf64Q2M2E5 130 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 VPS26BQ4G0F5 336 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 FFAR4Q5NUL3 377 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 LAMTOR1Q6IAA8 161 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 HAGHLQ6PII5 290 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 PLET1Q6UQ28 207 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 FAM151BQ6UXP7 276 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 TMEM184AQ6ZMB5 413 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 CYS1Q717R9 158 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 ABHD12BQ7Z5M8 362 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 C10orf107Q8IVU9 208 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF557Q8N988 423 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 LINC00301Q8NCQ3 95 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 OR2L2Q8NH16 312 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 PIH1D2Q8WWB5 315 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 SMIM12Q96EX1 92 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 WBP1Q96G27 269 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 RNF2Q99496 336 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 RBBP8Q99708 897 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 LITAFQ99732 161 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 TRIM51Q9BSJ1 452 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 REG4Q9BYZ8 158 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF436Q9C0F3 470 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 DCSTAMPQ9H295 470 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 IKZF5Q9H5V7 419 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 FGF22Q9HCT0 170 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms