RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 TMEM54Q969K7 222 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 APOPT1Q96IL0 206 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 NSL1Q96IY1 281 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 POM121L2Q96KW2 1035 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 PPP1R36Q96LQ0 422 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 TECTBQ96PL2 329 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 OR2V2Q96R30 315 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 OR8B2Q96RD0 313 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 SSX3Q99909 188 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 DCTN5Q9BTE1 182 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 THTPAQ9BU02 230 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 C1orf50Q9BV19 199 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 ULBP2Q9BZM5 246 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 BCL2L14Q9BZR8 327 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 LRMDAQ9H2I8 198 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF702PQ9H963 129 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 RNPEPL1Q9HAU8 725 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 EXOSC3Q9NQT5 275 aaKnown RBP2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 C20orf141Q9NUB4 165 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 ARL8BQ9NVJ2 186 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 TMEM38BQ9NVV0 291 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 C1orf109Q9NX04 203 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 LGALS13Q9UHV8 139 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 ATP6V1HQ9UI12 483 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 TMCC3Q9ULS5 477 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC35A3Q9Y2D2 325 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 STARD10Q9Y365 291 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 FAT2Q9NYQ8 4349 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 NUP214P35658 2090 aaPredicted RBP2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 HSPG2P98160 4391 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 IGHV3OR15-7A0A075B7D8 119 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 A0A087WUJ7 227 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 IGKV1D-43A0A0B4J1Z2 117 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 RNF103-CHMP3A0A140T963 221 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 IQCMA0A1B0GVH7 501 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 MAGEA13PA6NCF6 341 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 BTBD17A6NE02 478 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 SH2D7A6NKC9 451 aaPredicted RBP2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 G3V2L1 256 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 HMGN4O00479 90 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 PLPP3O14495 311 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 LSM1O15116 133 aaKnown RBP2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 NPFFO15130 113 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 HDAC3O15379 428 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 ENSAO43768 121 aaKnown RBP2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 AHCYL1O43865 530 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 CCDC22O60826 627 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 GLRA3O75311 464 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 CRCPO75575 148 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 LYPLA1O75608 230 aaPredicted RBP2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 SNAP29O95721 258 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 BGLAPP02818 100 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 HLA-DPB1P04440 258 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 SNRNP70P08621 437 aaKnown RBP2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 ABHD2P08910 425 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 GSTA2P09210 222 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 QDPRP09417 244 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 FBP1P09467 338 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 MYL2P10916 166 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 ETS2P15036 469 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 ACADSP16219 412 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF32P17041 273 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 STOMP27105 288 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 APLNRP35414 380 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 PSMB10P40306 273 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 CSNK1A1P48729 337 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 PKNOX1P55347 436 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC35A2P78381 396 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 PSG4Q00888 419 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 HSF2Q03933 536 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC34A1Q06495 639 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 ILF2Q12905 390 aaKnown RBP2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 STX3Q13277 289 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 NAB1Q13506 487 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 RIPK1Q13546 671 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 MPPED2Q15777 294 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 SGCAQ16586 387 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 GSTA3Q16772 222 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 DNAL1Q4LDG9 190 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 LRRC23Q53EV4 343 aaPredicted RBP2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 METTL11BQ5VVY1 283 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 IL23RQ5VWK5 629 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 PRAMEF6Q5VXH4 476 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 WBP2NLQ6ICG8 309 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 OR4F3Q6IEY1 312 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 OR2T2Q6IF00 324 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 C1orf94Q6P1W5 598 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 TMEM53Q6P2H8 277 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF836Q6ZNA1 936 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 COMTD1Q86VU5 262 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 RANBP3LQ86VV4 465 aaPredicted RBP2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 SPATA24Q86W54 205 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 TMEM219Q86XT9 240 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 NUDCD3Q8IVD9 361 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 CPOQ8IVL8 374 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 DYNAPQ8N1N2 210 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 PAPD5Q8NDF8 572 aaKnown RBP2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 OR5AU1Q8NGC0 362 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 OR4C13Q8NGP0 309 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 OR1J2Q8NGS2 313 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms