RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 MFGE8Q08431 387 aaPredicted RBP8.01□□□□□ -1.13
SSBP3-215ENST00000533946 PTGES3Q15185 160 aaKnown RBP8.01□□□□□ -1.13
SSBP3-215ENST00000533946 TAF13Q15543 124 aa8.01□□□□□ -1.13
SSBP3-215ENST00000533946 ZMAT1Q5H9K5 638 aa8.01□□□□□ -1.13
SSBP3-215ENST00000533946 RUSC1-AS1Q66K80 236 aa8.01□□□□□ -1.13
SSBP3-215ENST00000533946 SHQ1Q6PI26 577 aaKnown RBP8.01□□□□□ -1.13
SSBP3-215ENST00000533946 BRD3OSQ6XYD6 125 aa8.01□□□□□ -1.13
SSBP3-215ENST00000533946 SSX6Q7RTT6 188 aa8.01□□□□□ -1.13
SSBP3-215ENST00000533946 FAM90A1Q86YD7 464 aa8.01□□□□□ -1.13
SSBP3-215ENST00000533946 KLHL36Q8N4N3 616 aa8.01□□□□□ -1.13
SSBP3-215ENST00000533946 OR8B12Q8NGG6 310 aa8.01□□□□□ -1.13
SSBP3-215ENST00000533946 OTOSQ8NHW6 89 aa8.01□□□□□ -1.13
SSBP3-215ENST00000533946 SPSB4Q96A44 273 aa8.01□□□□□ -1.13
SSBP3-215ENST00000533946 REEP6Q96HR9 211 aa8.01□□□□□ -1.13
SSBP3-215ENST00000533946 WDR13Q9H1Z4 485 aa8.01□□□□□ -1.13
SSBP3-215ENST00000533946 SEMA6AQ9H2E6 1030 aa8.01□□□□□ -1.13
SSBP3-215ENST00000533946 TUBG2Q9NRH3 451 aa8.01□□□□□ -1.13
SSBP3-215ENST00000533946 ARRDC5A6NEK1 342 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 A8MXK9 166 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 PRR23D1E9PI22 279 aaPredicted RBP8□□□□□ -1.13
SSBP3-215ENST00000533946 J3QW42 95 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 PTBP3O95758 552 aaKnown RBP8□□□□□ -1.13
SSBP3-215ENST00000533946 LHBP01229 141 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 IFNGP01579 166 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 PRR23D2P0DMB1 279 aaPredicted RBP8□□□□□ -1.13
SSBP3-215ENST00000533946 ALOX5APP20292 161 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 PSMB10P40306 273 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 SLC3A1Q07837 685 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 MALLQ13021 153 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 DNAL1Q4LDG9 190 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 WDR25Q64LD2 544 aaPredicted RBP8□□□□□ -1.13
SSBP3-215ENST00000533946 SHFQ7M4L6 423 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 PDZD9Q8IXQ8 264 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 BATF2Q8N1L9 274 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 Q8TCH9 128 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 HPSE2Q8WWQ2 592 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 RPL3LQ92901 407 aaKnown RBP8□□□□□ -1.13
SSBP3-215ENST00000533946 COG8Q96MW5 612 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 IL4I1Q96RQ9 567 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 TEAD3Q99594 435 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 APOL4Q9BPW4 351 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 SSBP3Q9BWW4 388 aaPredicted RBP8□□□□□ -1.13
SSBP3-215ENST00000533946 SLC25A19Q9HC21 320 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 SNTG1Q9NSN8 517 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 BAIAP2Q9UQB8 552 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 POLR3KQ9Y2Y1 108 aaPredicted RBP8□□□□□ -1.13
SSBP3-215ENST00000533946 LRP12Q9Y561 859 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 AUP1Q9Y679 476 aa8□□□□□ -1.13
SSBP3-215ENST00000533946 IGHV2-70DA0A0C4DH43 119 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 SAC3D1A6NKF1 404 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 ZNF850A8MQ14 1090 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 SRSF10O75494 262 aaKnown RBP7.99□□□□□ -1.13
SSBP3-215ENST00000533946 FOXH1O75593 365 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 RHBDL1O75783 438 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 H2BFMP0C1H6 154 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 ANPEPP15144 967 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 PITPNBP48739 271 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 HILS1P60008 231 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 RPS7P62081 194 aaKnown RBP7.99□□□□□ -1.13
SSBP3-215ENST00000533946 ATP6AP1Q15904 470 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 SNAPC1Q16533 368 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 TIGD6Q17RP2 521 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 ZNF181Q2M3W8 571 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 WDR82Q6UXN9 313 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 SPICQ8N5J4 248 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 FAM216BQ8N7L0 139 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 TCEANCQ8N8B7 351 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 OR1M1Q8NGA1 313 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 RNF166Q96A37 237 aaPredicted RBP7.99□□□□□ -1.13
SSBP3-215ENST00000533946 ITPKCQ96DU7 683 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 NEIL1Q96FI4 390 aaPredicted RBP7.99□□□□□ -1.13
SSBP3-215ENST00000533946 PGAM5Q96HS1 289 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 ZNF488Q96MN9 340 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 TBX15Q96SF7 602 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 CCL13Q99616 98 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 SP140LQ9H930 580 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 PAPOLBQ9NRJ5 636 aaKnown RBP7.99□□□□□ -1.13
SSBP3-215ENST00000533946 TNFRSF19Q9NS68 423 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 FAM206AQ9NX38 181 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 RNF7Q9UBF6 113 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 DNAJB11Q9UBS4 358 aa7.99□□□□□ -1.13
SSBP3-215ENST00000533946 TRAV40A0A0B4J280 105 aa7.98□□□□□ -1.13
SSBP3-215ENST00000533946 A6NLC8 198 aa7.98□□□□□ -1.13
SSBP3-215ENST00000533946 H3BNX3 289 aa7.98□□□□□ -1.13
SSBP3-215ENST00000533946 J3QLI3 93 aa7.98□□□□□ -1.13
SSBP3-215ENST00000533946 CDIPTO14735 213 aa7.98□□□□□ -1.13
SSBP3-215ENST00000533946 ADAM20O43506 726 aa7.98□□□□□ -1.13
SSBP3-215ENST00000533946 LYNP07948 512 aa7.98□□□□□ -1.13
SSBP3-215ENST00000533946 ANXA8P13928 327 aa7.98□□□□□ -1.13
SSBP3-215ENST00000533946 PAX6P26367 422 aa7.98□□□□□ -1.13
SSBP3-215ENST00000533946 CFPP27918 469 aa7.98□□□□□ -1.13
SSBP3-215ENST00000533946 HSD11B1P28845 292 aa7.98□□□□□ -1.13
SSBP3-215ENST00000533946 FGF12P61328 243 aa7.98□□□□□ -1.13
SSBP3-215ENST00000533946 GNB2P62879 340 aa7.98□□□□□ -1.13
SSBP3-215ENST00000533946 UBA52P62987 128 aaKnown RBP7.98□□□□□ -1.13
SSBP3-215ENST00000533946 SRSF4Q08170 494 aaKnown RBP7.98□□□□□ -1.13
SSBP3-215ENST00000533946 PRDX4Q13162 271 aa7.98□□□□□ -1.13
SSBP3-215ENST00000533946 OR8B8Q15620 311 aa7.98□□□□□ -1.13
SSBP3-215ENST00000533946 ESCO2Q56NI9 601 aa7.98□□□□□ -1.13
SSBP3-215ENST00000533946 CEP78Q5JTW2 689 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms