RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 NKX6-3A6NJ46 265 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 NDUFB7P17568 137 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 OR1C1Q15619 314 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 HMGN3Q15651 99 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 LYG2Q86SG7 212 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 OR4D9Q8NGE8 314 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 WDR89Q96FK6 387 aaPredicted RBP15.73■□□□□ 0.11
PHRF1-205ENST00000533464 CMTM3Q96MX0 182 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 PROCRQ9UNN8 238 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 PRRG2O14669 202 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 THBS4P35443 961 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 RAB11AP62491 216 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 FZD5Q13467 585 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 CDONQ4KMG0 1287 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 TMEM268Q5VZI3 342 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 TRILQ7L0X0 811 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 VASH2Q86V25 355 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 OSR2Q8N2R0 312 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 PLK3Q9H4B4 646 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 PPP1R3CQ9UQK1 317 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 FABP6P51161 128 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 HIST2H3PS2Q5TEC6 136 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 DEFB108BQ8NET1 73 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 TERB2Q8NHR7 220 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 POC1BQ8TC44 478 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 ST8SIA4Q92187 359 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 ZNF831Q5JPB2 1677 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 TFF2Q03403 129 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 H2BFWTQ7Z2G1 175 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 DTWD2Q8NBA8 298 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 TMEM229BQ8NBD8 167 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 OR11G2Q8NGC1 345 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 PPP1R1CQ8WVI7 109 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 RTN4IP1Q8WWV3 396 aaPredicted RBP15.73■□□□□ 0.11
PHRF1-205ENST00000533464 OR5V1Q9UGF6 321 aa15.73■□□□□ 0.11
PHRF1-205ENST00000533464 PLPP3O14495 311 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 PEBP1P30086 187 aaKnown RBP15.72■□□□□ 0.11
PHRF1-205ENST00000533464 ZNF85Q03923 595 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 ACER2Q5QJU3 275 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 C17orf107Q6ZR85 190 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 SFTPA2Q8IWL1 248 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 ZNF808Q8N4W9 903 aaPredicted RBP15.72■□□□□ 0.11
PHRF1-205ENST00000533464 RELL2Q8NC24 303 aaPredicted RBP15.72■□□□□ 0.11
PHRF1-205ENST00000533464 FSCN3Q9NQT6 498 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 JTBO76095 146 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 WNT1P04628 370 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 GLRA1P23415 457 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 EXOSC2Q13868 293 aaKnown RBP15.72■□□□□ 0.11
PHRF1-205ENST00000533464 DEGS2Q6QHC5 323 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 FAM122BQ7Z309 247 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 TCTE3Q8IZS6 198 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 FAM173AQ9BQD7 235 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 SERPINE3A8MV23 424 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 MSL3P1P0C860 447 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 PIGPP57054 158 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 SMRP1Q8NCR6 262 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 C12orf10Q9HB07 376 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 MPZL1O95297 269 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 RPS23P62266 143 aaKnown RBP15.72■□□□□ 0.11
PHRF1-205ENST00000533464 UBE2IP63279 158 aaKnown RBP15.72■□□□□ 0.11
PHRF1-205ENST00000533464 NLRC3Q7RTR2 1065 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 PTP4A1Q93096 173 aa15.72■□□□□ 0.11
PHRF1-205ENST00000533464 ICMTO60725 284 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 LRP3O75074 770 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 ADRA2CP18825 462 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 MVDP53602 400 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 OR2B11Q5JQS5 317 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 SCCPDHQ8NBX0 429 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 BORCS7Q96B45 105 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 NIPSNAP3BQ9BS92 247 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 COL11A1P12107 1806 aaPredicted RBP15.71■□□□□ 0.11
PHRF1-205ENST00000533464 TXNL1O43396 289 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 FUT6P51993 359 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 FBXL14Q8N1E6 418 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 OR2AE1Q8NHA4 323 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 MCHR2Q969V1 340 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 EGLN1Q9GZT9 426 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 TAAR5O14804 337 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 ETFDHQ16134 617 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 SPATA46Q5T0L3 261 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 H3F3CQ6NXT2 135 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 LSMEM1Q8N8F7 131 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 PLXNB2O15031 1838 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 CYB5BO43169 146 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 RPL12P30050 165 aaKnown RBP15.71■□□□□ 0.11
PHRF1-205ENST00000533464 RAB1AP62820 205 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 GPX8Q8TED1 209 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 SMOC1Q9H4F8 434 aa15.71■□□□□ 0.11
PHRF1-205ENST00000533464 ZNF92Q03936 586 aa15.71■□□□□ 0.1
PHRF1-205ENST00000533464 CDH26Q8IXH8 852 aa15.71■□□□□ 0.1
PHRF1-205ENST00000533464 HPSE2Q8WWQ2 592 aa15.71■□□□□ 0.1
PHRF1-205ENST00000533464 ABHD1Q96SE0 405 aa15.71■□□□□ 0.1
PHRF1-205ENST00000533464 PURGQ9UJV8 347 aaKnown RBP15.71■□□□□ 0.1
PHRF1-205ENST00000533464 UNC13CQ8NB66 2214 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 ZFP92A6NM28 416 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 SDHBP21912 280 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 PNLIPRP3Q17RR3 467 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 SLC35G3Q8N808 338 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 TMEM52Q8NDY8 209 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 APOBEC3DQ96AK3 386 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms