RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 NUFIP1Q9UHK0 495 aaKnown RBP17.22■□□□□ 0.35
CCS-208ENST00000533244 MRM2Q9UI43 246 aaKnown RBP17.22■□□□□ 0.35
CCS-208ENST00000533244 IKZF2Q9UKS7 526 aa17.22■□□□□ 0.35
CCS-208ENST00000533244 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCS-208ENST00000533244 B4DSR2 109 aa17.21■□□□□ 0.35
CCS-208ENST00000533244 SLC16A6O15403 523 aa17.21■□□□□ 0.35
CCS-208ENST00000533244 LMX1BO60663 402 aa17.21■□□□□ 0.35
CCS-208ENST00000533244 TGFAP01135 160 aa17.21■□□□□ 0.35
CCS-208ENST00000533244 IGHV2-5P01817 119 aa17.21■□□□□ 0.35
CCS-208ENST00000533244 GFOD2Q3B7J2 385 aa17.21■□□□□ 0.35
CCS-208ENST00000533244 ZNF829Q3KNS6 432 aaPredicted RBP17.21■□□□□ 0.35
CCS-208ENST00000533244 ZNF684Q5T5D7 378 aa17.21■□□□□ 0.35
CCS-208ENST00000533244 KRT74Q7RTS7 529 aa17.21■□□□□ 0.35
CCS-208ENST00000533244 MOGAT3Q86VF5 341 aa17.21■□□□□ 0.35
CCS-208ENST00000533244 ENTHD1Q8IYW4 607 aa17.21■□□□□ 0.35
CCS-208ENST00000533244 SPERTQ8NA61 448 aa17.21■□□□□ 0.35
CCS-208ENST00000533244 PLPP7Q8NBV4 271 aa17.21■□□□□ 0.35
CCS-208ENST00000533244 CSNK2A3Q8NEV1 391 aa17.21■□□□□ 0.35
CCS-208ENST00000533244 APOL4Q9BPW4 351 aa17.21■□□□□ 0.35
CCS-208ENST00000533244 KCNS2Q9ULS6 477 aa17.21■□□□□ 0.35
CCS-208ENST00000533244 SVEP1Q4LDE5 3571 aa17.21■□□□□ 0.34
CCS-208ENST00000533244 LOC100130705A0A1B0GUX0 176 aa17.21■□□□□ 0.34
CCS-208ENST00000533244 A0A1W2PQL4 384 aaPredicted RBP17.21■□□□□ 0.34
CCS-208ENST00000533244 ANKRD30BLA7E2S9 258 aa17.21■□□□□ 0.34
CCS-208ENST00000533244 MAGEB4O15481 346 aaPredicted RBP17.21■□□□□ 0.34
CCS-208ENST00000533244 APOL3O95236 402 aa17.21■□□□□ 0.34
CCS-208ENST00000533244 FSTL3O95633 263 aa17.21■□□□□ 0.34
CCS-208ENST00000533244 PNPP00491 289 aa17.21■□□□□ 0.34
CCS-208ENST00000533244 ACKR3P25106 362 aa17.21■□□□□ 0.34
CCS-208ENST00000533244 MTNR1AP48039 350 aa17.21■□□□□ 0.34
CCS-208ENST00000533244 BTG1P62324 171 aa17.21■□□□□ 0.34
CCS-208ENST00000533244 MFGE8Q08431 387 aaPredicted RBP17.21■□□□□ 0.34
CCS-208ENST00000533244 TMEM155Q4W5P6 130 aa17.21■□□□□ 0.34
CCS-208ENST00000533244 LRRC28Q86X40 367 aaPredicted RBP17.21■□□□□ 0.34
CCS-208ENST00000533244 RHOXF1Q8NHV9 184 aa17.21■□□□□ 0.34
CCS-208ENST00000533244 DVL3Q92997 716 aaPredicted RBP17.21■□□□□ 0.34
CCS-208ENST00000533244 ITFG2Q969R8 447 aa17.21■□□□□ 0.34
CCS-208ENST00000533244 RAB39BQ96DA2 213 aa17.21■□□□□ 0.34
CCS-208ENST00000533244 PBOV1Q9GZY1 135 aa17.21■□□□□ 0.34
CCS-208ENST00000533244 MOB1AQ9H8S9 216 aa17.21■□□□□ 0.34
CCS-208ENST00000533244 C8orf4Q9NR00 106 aa17.21■□□□□ 0.34
CCS-208ENST00000533244 SMPD3Q9NY59 655 aaPredicted RBP17.21■□□□□ 0.34
CCS-208ENST00000533244 IGHV3-64DA0A0J9YX35 117 aa17.2■□□□□ 0.34
CCS-208ENST00000533244 J3QRE1 110 aa17.2■□□□□ 0.34
CCS-208ENST00000533244 DVL1P1P54792 670 aaPredicted RBP17.2■□□□□ 0.34
CCS-208ENST00000533244 ZMYND11Q15326 602 aa17.2■□□□□ 0.34
CCS-208ENST00000533244 MPPED2Q15777 294 aa17.2■□□□□ 0.34
CCS-208ENST00000533244 SNCBQ16143 134 aa17.2■□□□□ 0.34
CCS-208ENST00000533244 PRAMEF6Q5VXH4 476 aa17.2■□□□□ 0.34
CCS-208ENST00000533244 PACRGLQ8N7B6 248 aa17.2■□□□□ 0.34
CCS-208ENST00000533244 TBX5Q99593 518 aa17.2■□□□□ 0.34
CCS-208ENST00000533244 GAL3ST1Q99999 423 aa17.2■□□□□ 0.34
CCS-208ENST00000533244 G6PC2Q9NQR9 355 aa17.2■□□□□ 0.34
CCS-208ENST00000533244 R4GMQ9 66 aa17.2■□□□□ 0.34
CCS-208ENST00000533244 JMJD1CQ15652 2540 aa17.19■□□□□ 0.34
CCS-208ENST00000533244 ISPDA4D126 451 aa17.19■□□□□ 0.34
CCS-208ENST00000533244 MPZL2O60487 215 aa17.19■□□□□ 0.34
CCS-208ENST00000533244 CYB5R3P00387 301 aaPredicted RBP17.19■□□□□ 0.34
CCS-208ENST00000533244 LPCAT4Q643R3 524 aa17.19■□□□□ 0.34
CCS-208ENST00000533244 OR10H4Q8NGA5 316 aa17.19■□□□□ 0.34
CCS-208ENST00000533244 AASSQ9UDR5 926 aa17.19■□□□□ 0.34
CCS-208ENST00000533244 RHBDD3Q9Y3P4 386 aa17.19■□□□□ 0.34
CCS-208ENST00000533244 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.18■□□□□ 0.34
CCS-208ENST00000533244 CASQ2O14958 399 aaPredicted RBP17.18■□□□□ 0.34
CCS-208ENST00000533244 FAM20BO75063 409 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 SULT1C4O75897 302 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 CST4P01036 141 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 TTRP02766 147 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 KRT8P05787 483 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 MSMBP08118 114 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 PEX2P28328 305 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 ATP6V1E1P36543 226 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 ISL1P61371 349 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 ZNF85Q03923 595 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 MZT1Q08AG7 82 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 PLEKHG7Q6ZR37 379 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 C1orf87Q8N0U7 546 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 FTMTQ8N4E7 242 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 SPICQ8N5J4 248 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 PPP1R14AQ96A00 147 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 RNFT2Q96EX2 444 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 PPP1R3EQ9H7J1 279 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 CDC42EP3Q9UKI2 254 aa17.18■□□□□ 0.34
CCS-208ENST00000533244 LRRC30A6NM36 301 aa17.17■□□□□ 0.34
CCS-208ENST00000533244 SNTNA6NMZ2 147 aa17.17■□□□□ 0.34
CCS-208ENST00000533244 LOC110117498-PIK3R3F6TDL0 507 aa17.17■□□□□ 0.34
CCS-208ENST00000533244 ATP6V1B1P15313 513 aa17.17■□□□□ 0.34
CCS-208ENST00000533244 MDH2P40926 338 aaKnown RBP17.17■□□□□ 0.34
CCS-208ENST00000533244 ZNF91Q05481 1191 aa17.17■□□□□ 0.34
CCS-208ENST00000533244 LRRC36Q1X8D7 754 aa17.17■□□□□ 0.34
CCS-208ENST00000533244 WDR86Q86TI4 376 aa17.17■□□□□ 0.34
CCS-208ENST00000533244 ELMOD2Q8IZ81 293 aa17.17■□□□□ 0.34
CCS-208ENST00000533244 GALNT4Q8N4A0 578 aa17.17■□□□□ 0.34
CCS-208ENST00000533244 OR51F2Q8NH61 342 aa17.17■□□□□ 0.34
CCS-208ENST00000533244 OR51E1Q8TCB6 317 aa17.17■□□□□ 0.34
CCS-208ENST00000533244 ITPKCQ96DU7 683 aa17.17■□□□□ 0.34
CCS-208ENST00000533244 PAPOLGQ9BWT3 736 aaKnown RBP17.17■□□□□ 0.34
CCS-208ENST00000533244 FN3KRPQ9HA64 309 aa17.17■□□□□ 0.34
CCS-208ENST00000533244 PATZ1Q9HBE1 687 aaKnown RBP17.17■□□□□ 0.34
CCS-208ENST00000533244 GPR84Q9NQS5 396 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms