RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 PHF21AQ96BD5 680 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 PRRG4Q9BZD6 226 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 DPAGT1Q9H3H5 408 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 SLA2Q9H6Q3 261 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 MRPL22Q9NWU5 206 aaKnown RBP7.17□□□□□ -1.26
NEDD8-207ENST00000533242 ING3Q9NXR8 418 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 NKIRAS2Q9NYR9 191 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 MED11Q9P086 117 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 LPAR3Q9UBY5 353 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 SLC23A1Q9UHI7 598 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 V9GY05 133 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 TRBV5-5A0A0J9YX44 114 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 ALG1L2C9J202 215 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 G3V3Q6 166 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 GSTZ1O43708 216 aaPredicted RBP7.17□□□□□ -1.26
NEDD8-207ENST00000533242 NPIPB7O75200 414 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 MPZL1O95297 269 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 MAS1P04201 325 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 CTLA4P16410 223 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 CDK2P24941 298 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 EFNB2P52799 333 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 SNTB2Q13425 540 aaKnown RBP7.17□□□□□ -1.26
NEDD8-207ENST00000533242 MELKQ14680 651 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 Q499Y3 187 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 WDR38Q5JTN6 314 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 Q6ZTK2 550 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 GGNQ86UU5 652 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 ADGRG3Q86Y34 549 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 OR5M1Q8NGP8 315 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 OR2T4Q8NH00 348 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 SYNPRQ8TBG9 265 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 SNAPC3Q92966 411 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 WDR89Q96FK6 387 aaPredicted RBP7.17□□□□□ -1.26
NEDD8-207ENST00000533242 MED28Q9H204 178 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 OR51J1Q9H342 316 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 NGBQ9NPG2 151 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 LAMP5Q9UJQ1 280 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 FOXJ3Q9UPW0 622 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 SLC22A13Q9Y226 551 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 SONP18583 2426 aaKnown RBP7.16□□□□□ -1.26
NEDD8-207ENST00000533242 IGLV3-32A0A0A0MS00 114 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 CTDSPLO15194 276 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 FCER2P06734 321 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 DCTDP32321 178 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 HTR2BP41595 481 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 CCR9P51686 369 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 MFGE8Q08431 387 aaPredicted RBP7.16□□□□□ -1.26
NEDD8-207ENST00000533242 MRPL28Q13084 256 aaKnown RBP7.16□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF672Q499Z4 452 aaPredicted RBP7.16□□□□□ -1.26
NEDD8-207ENST00000533242 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.16□□□□□ -1.26
NEDD8-207ENST00000533242 GPR119Q8TDV5 335 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 DUSP19Q8WTR2 217 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 TMEM106AQ96A25 262 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 TRAF4Q9BUZ4 470 aaPredicted RBP7.16□□□□□ -1.26
NEDD8-207ENST00000533242 TBL1XR1Q9BZK7 514 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 C20orf85Q9H1P6 137 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 ESRP2Q9H6T0 727 aaKnown RBP7.16□□□□□ -1.26
NEDD8-207ENST00000533242 HRASLSQ9HDD0 168 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF222Q9UK12 451 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 MCTS1Q9ULC4 181 aaKnown RBP7.16□□□□□ -1.26
NEDD8-207ENST00000533242 MOKQ9UQ07 419 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 NUBP2Q9Y5Y2 271 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 A0A096LNT2 108 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 TRBV5-7A0A0A0MS05 114 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 SHISA8B8ZZ34 492 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 GPR171O14626 319 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 KDM4BO94953 1096 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 SYNGR4O95473 234 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF17P17021 662 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 CXCR1P25024 350 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 EIF1AXP47813 144 aaKnown RBP7.16□□□□□ -1.26
NEDD8-207ENST00000533242 VEGFCP49767 419 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 SELENOPP49908 381 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 P2RX1P51575 399 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 DSCR9P59020 149 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 FAM220AQ7Z4H9 259 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 OTOSQ8NHW6 89 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF519Q8TB69 540 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 NSMAFQ92636 917 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 S100PBPQ96BU1 408 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 ARL5BQ96KC2 179 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 C4orf45Q96LM5 186 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 INTS14Q96SY0 518 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 C19orf24Q9BVV8 132 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 B9D1Q9UPM9 204 aa7.16□□□□□ -1.26
NEDD8-207ENST00000533242 ANK3Q12955 4377 aaKnown RBP7.15□□□□□ -1.26
NEDD8-207ENST00000533242 TRAV36DV7A0A075B6V5 113 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 TMED7-TICAM2A0A0A6YYA0 188 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 IGLV1-36A0A0B4J1U3 117 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 IGKV1D-43A0A0B4J1Z2 117 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 PRSS37A4D1T9 235 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 EIF1AYO14602 144 aaKnown RBP7.15□□□□□ -1.26
NEDD8-207ENST00000533242 SLC16A7O60669 478 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 TSC22D2O75157 780 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF254O75437 659 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 DHFRP00374 187 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 HIST1H2ABP04908 130 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 H2AFB2P0C5Z0 115 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 STOMP27105 288 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 PITPNAQ00169 270 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms