RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 POLR2J3Q9H1A7 115 aaKnown RBP3.3□□□□□ -1.88
AC055878.1-201ENST00000531858 ARV1Q9H2C2 271 aa3.3□□□□□ -1.88
AC055878.1-201ENST00000531858 RDH14Q9HBH5 336 aa3.3□□□□□ -1.88
AC055878.1-201ENST00000531858 MED4Q9NPJ6 270 aa3.3□□□□□ -1.88
AC055878.1-201ENST00000531858 FGFR1OP2Q9NVK5 253 aa3.3□□□□□ -1.88
AC055878.1-201ENST00000531858 TAS2R9Q9NYW1 312 aa3.3□□□□□ -1.88
AC055878.1-201ENST00000531858 ZNF581Q9P0T4 197 aa3.3□□□□□ -1.88
AC055878.1-201ENST00000531858 DHRS4-AS1Q9P1J3 65 aa3.3□□□□□ -1.88
AC055878.1-201ENST00000531858 PRELID1Q9Y255 219 aa3.3□□□□□ -1.88
AC055878.1-201ENST00000531858 SIGLEC9Q9Y336 463 aa3.3□□□□□ -1.88
AC055878.1-201ENST00000531858 ZNF337Q9Y3M9 751 aa3.3□□□□□ -1.88
AC055878.1-201ENST00000531858 IGLV1-36A0A0B4J1U3 117 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 TRAV8-4A0A0B4J246 113 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 GJE1A6NN92 205 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 J3QLI3 93 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 PHYHO14832 338 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 PHF1O43189 567 aaPredicted RBP3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 ENSAO43768 121 aaKnown RBP3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 SSNA1O43805 119 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 MPZL2O60487 215 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 SERF1AO75920 110 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 P01737 135 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 RLN2P04090 185 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 IFNA6P05013 189 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 MMP7P09237 267 aaPredicted RBP3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 IGHV3-43DP0DP04 118 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 SNHG28P0DPA3 235 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 ZNF7P17097 686 aaPredicted RBP3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 F8A1P23610 371 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 COX7A1P24310 79 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 MYCNOSP40205 109 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 TUFMP49411 452 aaKnown RBP3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 GDI2P50395 445 aaKnown RBP3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 CAV2P51636 162 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 DLX6P56179 175 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 OR10A3P58181 314 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 ARF6P62330 175 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 MADCAM1Q13477 382 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 CLEC12BQ2HXU8 276 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 CEACAM21Q3KPI0 293 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 MED27Q6P2C8 311 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 EPGNQ6UW88 154 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 BAIAP2L2Q6UXY1 529 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 FAM220AQ7Z4H9 259 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 THOC6Q86W42 341 aaKnown RBP3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 C10orf67Q8IYJ2 551 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 ENTHD1Q8IYW4 607 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 FAM71E2Q8N5Q1 922 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 C19orf18Q8NEA5 215 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 OR4S2Q8NH73 311 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 RGP1Q92546 391 aaPredicted RBP3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 PTH2Q96A98 100 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 SMIM19Q96E16 107 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 SMARCD1Q96GM5 515 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 RNF145Q96MT1 663 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 PGLYRP2Q96PD5 576 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 OPRPNQ99935 248 aaPredicted RBP3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 UGT2B28Q9BY64 529 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 LHX5Q9H2C1 402 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 LINC00597Q9H2U6 94 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 RHOFQ9HBH0 211 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 COMMD9Q9P000 198 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 C3orf18Q9UK00 162 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 RAB22AQ9UL26 194 aa3.29□□□□□ -1.88
AC055878.1-201ENST00000531858 KIR2DL5BA0A0G2JN68 375 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 KIR2DL5BA0A0G2JPC4 375 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 OR2AT4A6NND4 320 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 M0QZ92 97 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 PEX7O00628 323 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 RAD1O60671 282 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 ZNF189O75820 626 aaPredicted RBP3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 AMBPP02760 352 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 ICAM2P13598 275 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 PVALBP20472 110 aaPredicted RBP3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 PSMB9P28065 219 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 SLCO1A2P46721 670 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 GALR1P47211 349 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 TTPAP49638 278 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 AQP5P55064 265 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 CCL7P80098 99 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 CXCL6P80162 114 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 PAX8Q06710 450 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 CKAP4Q07065 602 aaKnown RBP3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 TSPAN31Q12999 210 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 RUNX3Q13761 415 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 OR1Q1Q15612 314 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 RFX4Q33E94 735 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 SLC25A35Q3KQZ1 300 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 ZNF585BQ52M93 769 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 SPOPLQ6IQ16 392 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 KIR2DL5AQ8N109 375 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 ATPAF2Q8N5M1 289 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 OR52E4Q8NGH9 312 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 KIR2DL5BQ8NHK3 375 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 PHOSPHO2Q8TCD6 241 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 UCN3Q969E3 161 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 DCPSQ96C86 337 aaKnown RBP3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 HAUS1Q96CS2 278 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 AURKBQ96GD4 344 aaPredicted RBP3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 FAM19A4Q96LR4 140 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms