RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 CPVLQ9H3G5 476 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 TXNIPQ9H3M7 391 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 PLK3Q9H4B4 646 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 RBM22Q9NW64 420 aaKnown RBP eCLIP4.92□□□□□ -1.62
CD44-231ENST00000531110 GPATCH2LQ9NWQ4 482 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 PEMTQ9UBM1 199 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 ZNF346Q9UL40 294 aaKnown RBP4.92□□□□□ -1.62
CD44-231ENST00000531110 BTRCQ9Y297 605 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 STRAPQ9Y3F4 350 aaKnown RBP4.92□□□□□ -1.62
CD44-231ENST00000531110 INSL5Q9Y5Q6 135 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 PTGDR2Q9Y5Y4 395 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 URGCP-MRPS24S4R325 110 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 SLIT2O94813 1529 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 DDX60LQ5H9U9 1706 aaKnown RBP4.92□□□□□ -1.62
CD44-231ENST00000531110 LRRC37A3O60309 1634 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 NHSL1Q5SYE7 1610 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 SLX4Q8IY92 1834 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 CKAP5Q14008 2032 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 A0A1W2PPE3 182 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 OOEPA6NGQ2 149 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 H3BN98 237 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 M0R296 226 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 BCKDKO14874 412 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 PCDH7O60245 1069 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 MPZL2O60487 215 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 SCGB2A1O75556 95 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 ANXA9O76027 345 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 OR6A2O95222 327 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 MT-CO2P00403 227 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 SERPIND1P05546 499 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 SNRPCP09234 159 aaKnown RBP4.91□□□□□ -1.62
CD44-231ENST00000531110 ZSCAN5DPP0CG00 497 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 RD3LP0DJH9 198 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 SRD5A1P18405 259 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 IMPA1P29218 277 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 SLC6A8P48029 635 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 NPBWR1P48145 328 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 SELENOWP63302 87 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 PAX2Q02962 417 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 MXD1Q05195 221 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 PLA2G7Q13093 441 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 AIMP2Q13155 320 aaKnown RBP4.91□□□□□ -1.62
CD44-231ENST00000531110 UBE2V2Q15819 145 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 IFI44LQ53G44 452 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 PYDC2Q56P42 97 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 KHDC3LQ587J8 217 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 ZNF789Q5FWF6 425 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 OR10K2Q6IF99 312 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 KRTAP5-3Q6L8H2 238 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 FAM71F2Q6NXP2 309 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 ZNF613Q6PF04 617 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 TMEM205Q6UW68 189 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 APOOLQ6UXV4 268 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 CHST9Q7L1S5 443 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 ZDHHC21Q8IVQ6 265 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 TMEM183AQ8IXX5 376 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 JAGN1Q8N5M9 183 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 TMEM185AQ8NFB2 350 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 OLIG1Q8TAK6 271 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 BCL2L2Q92843 193 aaPredicted RBP4.91□□□□□ -1.62
CD44-231ENST00000531110 TOMM40LQ969M1 308 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 MOB3AQ96BX8 217 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 ACY3Q96HD9 319 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 DIRAS2Q96HU8 199 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 GUCD1Q96NT3 240 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 AMDHD1Q96NU7 426 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 IL17FQ96PD4 163 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 ATOH8Q96SQ7 321 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 IMMP2LQ96T52 175 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 CITED1Q99966 193 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 NAA11Q9BSU3 229 aaPredicted RBP4.91□□□□□ -1.62
CD44-231ENST00000531110 C1QTNF6Q9BXI9 259 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 RAB34Q9BZG1 259 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 OR2J1Q9GZK6 312 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 C20orf27Q9GZN8 174 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 ZBP1Q9H171 429 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 SLC32A1Q9H598 525 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 GEMIN7Q9H840 131 aaKnown RBP4.91□□□□□ -1.62
CD44-231ENST00000531110 MTHFD2LQ9H903 347 aaPredicted RBP4.91□□□□□ -1.62
CD44-231ENST00000531110 GPN1Q9HCN4 374 aaPredicted RBP4.91□□□□□ -1.62
CD44-231ENST00000531110 OR2S2Q9NQN1 319 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 PSORS1C1Q9UIG5 152 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 ZNF391Q9UJN7 358 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 ZNF223Q9UK11 482 aaPredicted RBP4.91□□□□□ -1.62
CD44-231ENST00000531110 MCTS1Q9ULC4 181 aaKnown RBP4.91□□□□□ -1.62
CD44-231ENST00000531110 DOCK5Q9H7D0 1870 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 WDR81Q562E7 1941 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 NUP188Q5SRE5 1749 aa4.91□□□□□ -1.62
CD44-231ENST00000531110 ZNF646O15015 1829 aaPredicted RBP4.9□□□□□ -1.62
CD44-231ENST00000531110 C5P01031 1676 aa4.9□□□□□ -1.62
CD44-231ENST00000531110 PXDNQ92626 1479 aa4.9□□□□□ -1.62
CD44-231ENST00000531110 TIAM2Q8IVF5 1701 aa4.9□□□□□ -1.62
CD44-231ENST00000531110 ARAP2Q8WZ64 1704 aa4.9□□□□□ -1.62
CD44-231ENST00000531110 NWD2Q9ULI1 1742 aa4.9□□□□□ -1.62
CD44-231ENST00000531110 A0A1B0GVT2 93 aa4.9□□□□□ -1.63
CD44-231ENST00000531110 A0A1B0GW15 77 aa4.9□□□□□ -1.63
CD44-231ENST00000531110 ANKRD20A5PA0PJZ0 165 aa4.9□□□□□ -1.63
CD44-231ENST00000531110 IGSF23A1L1A6 192 aa4.9□□□□□ -1.63
CD44-231ENST00000531110 OR6C76A6NM76 312 aa4.9□□□□□ -1.63
CD44-231ENST00000531110 G3V4G9 280 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms