RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 CLEC18CQ8NCF0 446 aa6.59□□□□□ -1.35
CTNND1-229ENST00000531014 FAM71CQ8NEG0 241 aa6.59□□□□□ -1.35
CTNND1-229ENST00000531014 MOB3AQ96BX8 217 aa6.59□□□□□ -1.35
CTNND1-229ENST00000531014 ADAT3Q96EY9 351 aaPredicted RBP6.59□□□□□ -1.35
CTNND1-229ENST00000531014 DTD2Q96FN9 168 aa6.59□□□□□ -1.35
CTNND1-229ENST00000531014 APIPQ96GX9 242 aa6.59□□□□□ -1.35
CTNND1-229ENST00000531014 SMOC2Q9H3U7 446 aa6.59□□□□□ -1.35
CTNND1-229ENST00000531014 SLC45A2Q9UMX9 530 aa6.59□□□□□ -1.35
CTNND1-229ENST00000531014 TMEM184BQ9Y519 407 aaPredicted RBP6.59□□□□□ -1.35
CTNND1-229ENST00000531014 FITM1A5D6W6 292 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 S1PR4O95977 384 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 SLC25A5P05141 298 aaKnown RBP6.58□□□□□ -1.36
CTNND1-229ENST00000531014 FDXRP22570 491 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 HLA-DRB3P79483 266 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 CLPPQ16740 277 aaPredicted RBP6.58□□□□□ -1.36
CTNND1-229ENST00000531014 SAMD13Q5VXD3 122 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 IGDCC3Q8IVU1 814 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 OR52I2Q8NH67 350 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 OIT3Q8WWZ8 545 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 SIRT7Q9NRC8 400 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 PSG11Q9UQ72 335 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 DICER1Q9UPY3 1922 aaKnown RBP6.58□□□□□ -1.36
CTNND1-229ENST00000531014 COL11A2P13942 1736 aaPredicted RBP6.58□□□□□ -1.36
CTNND1-229ENST00000531014 BLACEA4D250 179 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 MAP1LC3B2A6NCE7 125 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 ZNF98A6NK75 572 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 C17orf105B2RV13 164 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 H7C2G1 150 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 TNFRSF10CO14798 259 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 GOSR1O95249 250 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 CDS2O95674 445 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 HMGN2P05204 90 aaKnown RBP6.58□□□□□ -1.36
CTNND1-229ENST00000531014 RNASE1P07998 156 aaKnown RBP6.58□□□□□ -1.36
CTNND1-229ENST00000531014 CLEC2LP0C7M8 214 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 WNT3P56703 355 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 SMAGPQ0VAQ4 97 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 OLIG2Q13516 323 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 CYS1Q717R9 158 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 PRSS45Q7RTY3 260 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 SLC38A9Q8NBW4 561 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 RTN4IP1Q8WWV3 396 aaPredicted RBP6.58□□□□□ -1.36
CTNND1-229ENST00000531014 MRAP2Q96G30 205 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 TAAR6Q96RI8 345 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 NMNAT3Q96T66 252 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 CITED1Q99966 193 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 ZPBPQ9BS86 351 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 MAP1LC3BQ9GZQ8 125 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 SRPK3Q9UPE1 567 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 LSM2Q9Y333 95 aaKnown RBP6.58□□□□□ -1.36
CTNND1-229ENST00000531014 EMC9Q9Y3B6 208 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 PPP1R11O60927 126 aaPredicted RBP6.58□□□□□ -1.36
CTNND1-229ENST00000531014 CSO75390 466 aaKnown RBP6.58□□□□□ -1.36
CTNND1-229ENST00000531014 CST4P01036 141 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 OR4E1P0C645 316 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 SLC35E2P0CK97 266 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 RNF224P0DH78 156 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 CEACAM1P13688 526 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 CSRP1P21291 193 aaKnown RBP6.58□□□□□ -1.36
CTNND1-229ENST00000531014 ELAVL4P26378 380 aaKnown RBP6.58□□□□□ -1.36
CTNND1-229ENST00000531014 GDF1P27539 372 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 CLDN20P56880 219 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 CDC20Q12834 499 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 CST6Q15828 149 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 VHLLQ6RSH7 139 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 ACOT4Q8N9L9 421 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 AGBL5Q8NDL9 886 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 PIGTQ969N2 578 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 BOD1Q96IK1 185 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 ASB16Q96NS5 453 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 ACER3Q9NUN7 267 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 NRXN2Q9P2S2 1712 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 DIRC3C9JPN6 131 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 FOXO1Q12778 655 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 TPBGQ13641 420 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 LYG2Q86SG7 212 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 C5orf17Q8NAS9 161 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 GLIS1Q8NBF1 620 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 PLPP7Q8NBV4 271 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 OR2I1PQ8NGU4 316 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 VN1R17PQ8TDU5 208 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 PPP1R1CQ8WVI7 109 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 NARFLQ9H6Q4 476 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 RASL12Q9NYN1 266 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 POLDIP2Q9Y2S7 368 aa6.58□□□□□ -1.36
CTNND1-229ENST00000531014 ZNF487B1APH4 448 aa6.57□□□□□ -1.36
CTNND1-229ENST00000531014 MASP2O00187 686 aa6.57□□□□□ -1.36
CTNND1-229ENST00000531014 CYR61O00622 381 aa6.57□□□□□ -1.36
CTNND1-229ENST00000531014 F13BP05160 661 aa6.57□□□□□ -1.36
CTNND1-229ENST00000531014 NMUP48645 174 aa6.57□□□□□ -1.36
CTNND1-229ENST00000531014 HTR6P50406 440 aa6.57□□□□□ -1.36
CTNND1-229ENST00000531014 RELQ04864 619 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-229ENST00000531014 SMUG1Q53HV7 270 aa6.57□□□□□ -1.36
CTNND1-229ENST00000531014 RHBDD2Q6NTF9 364 aa6.57□□□□□ -1.36
CTNND1-229ENST00000531014 AAED1Q7RTV5 226 aa6.57□□□□□ -1.36
CTNND1-229ENST00000531014 BVESQ8NE79 360 aa6.57□□□□□ -1.36
CTNND1-229ENST00000531014 ERGIC1Q969X5 290 aa6.57□□□□□ -1.36
CTNND1-229ENST00000531014 UTP4Q969X6 686 aaKnown RBP6.57□□□□□ -1.36
CTNND1-229ENST00000531014 SLC25A46Q96AG3 418 aa6.57□□□□□ -1.36
CTNND1-229ENST00000531014 THOC3Q96J01 351 aaKnown RBP6.57□□□□□ -1.36
CTNND1-229ENST00000531014 TBX15Q96SF7 602 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms