RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 OR56B1Q8NGI3 324 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 OR1J2Q8NGS2 313 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 OR14L1PQ8NHC6 308 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 AQP3Q92482 292 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 FGGYQ96C11 551 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 ORAI1Q96D31 301 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 SEH1LQ96EE3 360 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 FAHD2AQ96GK7 314 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 FER1L6-AS2Q96M78 137 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 SFXN2Q96NB2 322 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 FOXN4Q96NZ1 517 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 GNRHR2Q96P88 292 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 OR2A7Q96R45 310 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 PRRT1Q99946 306 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 URM1Q9BTM9 101 aaKnown RBP4.89□□□□□ -1.63
PCF11-205ENST00000530906 ULBP2Q9BZM5 246 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 LINC00470Q9BZP3 86 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 ZNF436Q9C0F3 470 aaPredicted RBP4.89□□□□□ -1.63
PCF11-205ENST00000530906 CST11Q9H112 138 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 OR10A2Q9H208 303 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 TMEM185BQ9H7F4 350 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 CNTD2Q9H8S5 307 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 RNF122Q9H9V4 155 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 PNRC2Q9NPJ4 139 aaKnown RBP4.89□□□□□ -1.63
PCF11-205ENST00000530906 TMEM9BQ9NQ34 198 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.89□□□□□ -1.63
PCF11-205ENST00000530906 PARPBPQ9NWS1 579 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 PLEKHA6Q9Y2H5 1048 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 RHBDD3Q9Y3P4 386 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 XIRP2A4UGR9 3374 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 CACNA1CQ13936 2221 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 EML6Q6ZMW3 1958 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 A0A087WV48 116 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 A0A0J9YW62 118 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 LRRC3CA6NJW4 275 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 ZNF736B4DX44 427 aaPredicted RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 ZNF814B7Z6K7 855 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 STMND1H3BQB6 276 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 ARPC1BO15143 372 aaKnown RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 SMAD9O15198 467 aaKnown RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 FABP7O15540 132 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 TPD52L2O43399 206 aaKnown RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 GMDSO60547 372 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 CYTIPO60759 359 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 FARS2O95363 451 aaKnown RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 RAB3DO95716 219 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 HPNP05981 417 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 CELA2AP08217 269 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 GTF2F2P13984 249 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 POU3F2P20265 443 aaPredicted RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 VEGFCP49767 419 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 NKX2-5P52952 324 aaPredicted RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 GFRA1P56159 465 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 QRFPP83859 136 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 DHODHQ02127 395 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 SPOCK1Q08629 439 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 Q0VFX4 171 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 ENDOGQ14249 297 aaKnown RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 INPP5JQ15735 1006 aaPredicted RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 SGCAQ16586 387 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 ST3GAL2Q16842 350 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 HYAL4Q2M3T9 481 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 LINC00303Q3SY05 128 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 RNASE12Q5GAN4 147 aaKnown RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 RNASE10Q5GAN6 216 aaKnown RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 CLVS2Q5SYC1 327 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 TMEM53Q6P2H8 277 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 CORO6Q6QEF8 472 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 ZNF627Q7L945 461 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 TIPARPQ7Z3E1 657 aaKnown RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 REC114Q7Z4M0 266 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 MDGA2Q7Z553 956 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 GGNQ86UU5 652 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 GLCCI1Q86VQ1 547 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 ZNF100Q8IYN0 542 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 GABRG1Q8N1C3 465 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 ZDHHC22Q8N966 263 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 ZIC4Q8N9L1 334 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 STEAP2Q8NFT2 490 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 OR11H7Q8NGC8 314 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 OR8B12Q8NGG6 310 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 OR51A2Q8NGJ7 313 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 OR4C16Q8NGL9 310 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 LILRB4Q8NHJ6 448 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 OR51E1Q8TCB6 317 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 ZNF431Q8TF32 576 aaPredicted RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 SSC4DQ8WTU2 575 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 PSMF1Q92530 271 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 SNAPC3Q92966 411 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 NABP1Q96AH0 204 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 SPSB1Q96BD6 273 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 DNAJA3Q96EY1 480 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 ADAT3Q96EY9 351 aaPredicted RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 PGAM5Q96HS1 289 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 ADGRG7Q96K78 797 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 JSRP1Q96MG2 331 aaPredicted RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 SCGB3A2Q96PL1 93 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 SMAD5Q99717 465 aaKnown RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 GINS4Q9BRT9 223 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 EDEM2Q9BV94 578 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms