RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SAXO2Q658L1 398 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 AAED1Q7RTV5 226 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 SPATA19Q7Z5L4 167 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 ABHD12BQ7Z5M8 362 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-213ENST00000530784 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.51□□□□□ -1.53
CSDE1-213ENST00000530784 NEURL3Q96EH8 262 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 PPP1R36Q96LQ0 422 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 C2orf48Q96LS8 159 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 ZIM3Q96PE6 472 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 KCNS3Q9BQ31 491 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 SOSTQ9BQB4 213 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 SLC35A5Q9BS91 424 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 CA10Q9NS85 328 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 MARCOQ9UEW3 520 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-213ENST00000530784 CR1P17927 2039 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 COL6A5A8TX70 2615 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 ATRQ13535 2644 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 USF3Q68DE3 2245 aa5.51□□□□□ -1.53
CSDE1-213ENST00000530784 TLN2Q9Y4G6 2542 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 HEATR5AQ86XA9 2040 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 STAB1Q9NY15 2570 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 IGHV1-18A0A0C4DH31 117 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 LOC390937A0A1W2PQ73 354 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 CFAP73A6NFT4 308 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 E9PBE3 544 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 CCL24O00175 119 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 HMGN4O00479 90 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 FAAHO00519 579 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 SCN2BO60939 215 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 PDE5AO76074 875 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 AKR7A3O95154 331 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 CXCR1P25024 350 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 SLC1A3P43003 542 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 UBE2NP61088 152 aaKnown RBP5.5□□□□□ -1.53
CSDE1-213ENST00000530784 MZT1Q08AG7 82 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 COX10Q12887 443 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 CEACAM7Q14002 265 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 OPCMLQ14982 345 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 OR7A5Q15622 319 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 IQCCQ4KMZ1 466 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 HIKESHIQ53FT3 197 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 SPANXN4Q5MJ08 99 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 AP1ARQ63HQ0 302 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 RNF130Q86XS8 419 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 FAM89BQ8N5H3 189 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 TRIML2Q8N7C3 387 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 ZNF781Q8N8C0 355 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 ANKFN1Q8N957 763 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 OR9K2Q8NGE7 335 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 SETD6Q8TBK2 473 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 TESCQ96BS2 214 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 AURKBQ96GD4 344 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-213ENST00000530784 TRNT1Q96Q11 434 aaKnown RBP5.5□□□□□ -1.53
CSDE1-213ENST00000530784 ALKBH3Q96Q83 286 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-213ENST00000530784 SLC38A2Q96QD8 506 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 KATNB1Q9BVA0 655 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 TAPBPLQ9BX59 468 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 BPESC1Q9GZL8 116 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 B3GAT2Q9NPZ5 323 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 NDE1Q9NXR1 346 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 LGALS13Q9UHV8 139 aa5.5□□□□□ -1.53
CSDE1-213ENST00000530784 ANK3Q12955 4377 aaKnown RBP5.49□□□□□ -1.53
CSDE1-213ENST00000530784 ARPC4-TTLL3A0A0A6YYG9 625 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 TRBV4-1A0A0J9YWV2 114 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 A0A1W2PPW3 197 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 OR6C65A6NJZ3 312 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 TYROBPO43914 113 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 LGI1O95970 557 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 TGFAP01135 160 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 SERPINE1P05121 402 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 DBIP07108 87 aaKnown RBP5.49□□□□□ -1.53
CSDE1-213ENST00000530784 ERCC1P07992 297 aaPredicted RBP5.49□□□□□ -1.53
CSDE1-213ENST00000530784 OR4A8P0C604 315 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 LBPP18428 481 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 RPS4Y1P22090 263 aaKnown RBP5.49□□□□□ -1.53
CSDE1-213ENST00000530784 PAX7P23759 505 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 S100A3P33764 101 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 PPOXP50336 477 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 PAX8Q06710 450 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 CASP8Q14790 479 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 CHI3L2Q15782 390 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 SYPL1Q16563 259 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 MRPL2Q5T653 305 aaKnown RBP5.49□□□□□ -1.53
CSDE1-213ENST00000530784 PRAMEF8Q5VWM4 474 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 PRAMEF7Q5VXH5 474 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 LIPNQ5VXI9 398 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 TMEM225Q6GV28 225 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 LRRC74BQ6ZQY2 392 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 NUDCD3Q8IVD9 361 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 PEX5LQ8IYB4 626 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 LRRC34Q8IZ02 419 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 CADM2Q8N3J6 435 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 TMEM99Q8N816 258 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 ZIC4Q8N9L1 334 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 ZNF540Q8NDQ6 660 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 OR1K1Q8NGR3 316 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 PKNOX2Q96KN3 472 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 CCDC115Q96NT0 180 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 FOXN4Q96NZ1 517 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 ZNF317Q96PQ6 595 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms