RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 SSMEM1Q8WWF3 244 aa17.12■□□□□ 0.33
TSPAN4-219ENST00000530404 SEH1LQ96EE3 360 aa17.12■□□□□ 0.33
TSPAN4-219ENST00000530404 TRIM15Q9C019 465 aa17.12■□□□□ 0.33
TSPAN4-219ENST00000530404 SEMA6AQ9H2E6 1030 aa17.12■□□□□ 0.33
TSPAN4-219ENST00000530404 IL1RAPQ9NPH3 570 aa17.12■□□□□ 0.33
TSPAN4-219ENST00000530404 TRIM36Q9NQ86 728 aa17.12■□□□□ 0.33
TSPAN4-219ENST00000530404 TBC1D23Q9NUY8 699 aa17.12■□□□□ 0.33
TSPAN4-219ENST00000530404 CD300AQ9UGN4 299 aa17.12■□□□□ 0.33
TSPAN4-219ENST00000530404 RNF114Q9Y508 228 aa17.12■□□□□ 0.33
TSPAN4-219ENST00000530404 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 ZNF593O00488 134 aaPredicted RBP17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 NDUFA2O43678 99 aa17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 GPR137BO60478 399 aa17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 LHBP01229 141 aa17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 DLX1P56177 255 aa17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 CSNK2BP67870 215 aa17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 CRMP1Q14194 572 aa17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 PCK2Q16822 640 aa17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 TEX36Q5VZQ5 186 aa17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 VMO1Q7Z5L0 202 aa17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 C11orf53Q8IXP5 236 aa17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 OR8S1Q8NH09 359 aa17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 LRRC29Q8WV35 223 aa17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 CDRT15Q96T59 188 aa17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 CCL13Q99616 98 aa17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 DNAJB11Q9UBS4 358 aa17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 LYVE1Q9Y5Y7 322 aa17.11■□□□□ 0.33
TSPAN4-219ENST00000530404 ANKRD30BLA7E2S9 258 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 ZNF878C9JN71 531 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 TNFRSF11BO00300 401 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 GASTP01350 101 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 ANXA2P07355 339 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 FMO3P31513 532 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 CX3CR1P49238 355 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 RPL13AP3Q6NVV1 102 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 SLC16A9Q7RTY1 509 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 PGAM4Q8N0Y7 254 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 PIP4P2Q8N4L2 257 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 SPERTQ8NA61 448 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 OR4C15Q8NGM1 316 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 OR6K6Q8NGW6 343 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 OR4Q3Q8NH05 313 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 LINC01006Q8NI28 216 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 DYRK2Q92630 601 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 TSSK6Q9BXA6 273 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 C14orf119Q9NWQ9 140 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 IL20Q9NYY1 176 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 ONECUT1Q9UBC0 465 aa17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 RPUSD1Q9UJJ7 312 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-219ENST00000530404 XRCC2O43543 280 aa17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 SOX14O95416 240 aa17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 IER3P46695 156 aa17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 GMFBP60983 142 aa17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 FAM3AP98173 230 aa17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 GFOD2Q3B7J2 385 aa17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 WDR38Q5JTN6 314 aa17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 SAMD4BQ5PRF9 694 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 ASPHD2Q6ICH7 369 aa17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 CYP2R1Q6VVX0 501 aa17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 DPY19L4Q7Z388 723 aa17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 FAM216BQ8N7L0 139 aa17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 OR1M1Q8NGA1 313 aa17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 SPSB4Q96A44 273 aa17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 CNTD2Q9H8S5 307 aa17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 ARMC1Q9NVT9 282 aa17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 DNAJC27Q9NZQ0 273 aa17.09■□□□□ 0.33
TSPAN4-219ENST00000530404 A0A1W2PRD5 423 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 A0A1W2PRF3 423 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 A0A1W2PRM7 423 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 DHRS12A0PJE2 317 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 SPI1P17947 270 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 MZT1Q08AG7 82 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 EIF2B1Q14232 305 aaKnown RBP17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 TIGD6Q17RP2 521 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 RASSF6Q6ZTQ3 369 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 LDLRAD3Q86YD5 345 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 AQP11Q8NBQ7 271 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 SGK3Q96BR1 496 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 REEP6Q96HR9 211 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 OPA3Q9H6K4 179 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 MED20Q9H944 212 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 BRD7Q9NPI1 651 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 SIRT7Q9NRC8 400 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 KAAG1Q9UBP8 84 aa17.08■□□□□ 0.32
TSPAN4-219ENST00000530404 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.07■□□□□ 0.32
TSPAN4-219ENST00000530404 M0QZ24 198 aa17.07■□□□□ 0.32
TSPAN4-219ENST00000530404 ACOT8O14734 319 aa17.07■□□□□ 0.32
TSPAN4-219ENST00000530404 CCNB2O95067 398 aa17.07■□□□□ 0.32
TSPAN4-219ENST00000530404 ECDO95905 644 aaPredicted RBP17.07■□□□□ 0.32
TSPAN4-219ENST00000530404 TFF1P04155 84 aa17.07■□□□□ 0.32
TSPAN4-219ENST00000530404 SELLP14151 372 aa17.07■□□□□ 0.32
TSPAN4-219ENST00000530404 ATP6V1B2P21281 511 aa17.07■□□□□ 0.32
TSPAN4-219ENST00000530404 HSD11B1P28845 292 aa17.07■□□□□ 0.32
TSPAN4-219ENST00000530404 HMGA2P52926 109 aa17.07■□□□□ 0.32
TSPAN4-219ENST00000530404 KLRD1Q13241 179 aa17.07■□□□□ 0.32
TSPAN4-219ENST00000530404 IKZF1Q13422 519 aa17.07■□□□□ 0.32
TSPAN4-219ENST00000530404 OCLNQ16625 522 aa17.07■□□□□ 0.32
TSPAN4-219ENST00000530404 MICBQ29980 383 aa17.07■□□□□ 0.32
TSPAN4-219ENST00000530404 CDONQ4KMG0 1287 aa17.07■□□□□ 0.32
TSPAN4-219ENST00000530404 KLHL12Q53G59 568 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms