RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 ZNF75AQ96N20 296 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 NUDT9Q9BW91 350 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 TOLLIPQ9H0E2 274 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 OR5V1Q9UGF6 321 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 SERPINE3A8MV23 424 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 SSSCA1O60232 199 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 THBS4P35443 961 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 PPP2CBP62714 309 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 PPP2CAP67775 309 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 IFITM3Q01628 133 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 DHRS2Q13268 280 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 VHLLQ6RSH7 139 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 SMIM15Q7Z3B0 74 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 CISD2Q8N5K1 135 aaKnown RBP13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 LHX4Q969G2 390 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 ADGRL4Q9HBW9 690 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 ZNF391Q9UJN7 358 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 LAMP3Q9UQV4 416 aa13.92□□□□□ -0.18
PCDHA4-203ENST00000530339 H0Y8X5 98 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 SUB1P53999 127 aaKnown RBP eCLIP13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 PIGPP57054 158 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 C9orf62Q8N4C0 152 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 MIXL1Q9H2W2 232 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 NINQ8N4C6 2090 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 RD3LP0DJH9 198 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 NQO2P16083 231 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 PP6455Q8WZ26 134 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 C20orf141Q9NUB4 165 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 MED29Q9NX70 200 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 SPTY2D1-AS1A0A0U1RR47 76 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 SH2D1BO14796 132 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 MBP02144 154 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 DTYMKP23919 212 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 IRF3Q14653 427 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 RBMXL3Q8N7X1 1067 aaKnown RBP13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 C17orf47Q8NEP4 570 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 C11orf40Q8WZ69 217 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 CST4P01036 141 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 TMPRSS7Q7RTY8 843 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 LSRQ86X29 649 aaPredicted RBP13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 PATE1Q8WXA2 126 aa13.91□□□□□ -0.18
PCDHA4-203ENST00000530339 FIGNL2A6NMB9 653 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 TMEM196Q5HYL7 178 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 THOC3Q96J01 351 aaKnown RBP13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 LIN7CQ9NUP9 197 aaKnown RBP13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 TTC3P53804 2025 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 LMO7DNF2Z398 122 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 PLA2G10O15496 165 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 NRASP01111 189 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 IL2RAP01589 272 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 MYOGP15173 224 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 ZNF787Q6DD87 383 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 LAIR1Q6GTX8 287 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 OR2T2Q6IF00 324 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 ZNF793Q6ZN11 406 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 H2BFWTQ7Z2G1 175 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 FAM58AQ8N1B3 248 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 TMEM18Q96B42 140 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 EID2BQ96D98 161 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 TVP23CQ96ET8 276 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 ANKRD20A5PA0PJZ0 165 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 CCR2P41597 374 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 NOVA1P51513 510 aaKnown RBP13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 DEGS2Q6QHC5 323 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 CIB3Q96Q77 187 aaPredicted RBP13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 IER2Q9BTL4 223 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 RYDENQ9NUL5 291 aaKnown RBP13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 CCL27Q9Y4X3 112 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 IGHV3-20A0A0C4DH32 117 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 NPIPB8E9PQR5 432 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 RAB13P51153 203 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 OTPQ5XKR4 325 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 HGDQ93099 445 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 CHST6Q9GZX3 395 aa13.9□□□□□ -0.18
PCDHA4-203ENST00000530339 APOA2P02652 100 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 MGST1P10620 155 aaKnown RBP13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 NAT1P18440 290 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 C19orf57Q0VDD7 668 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 PHYHD1Q5SRE7 291 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 LILRA6Q6PI73 481 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 TP53I13Q8NBR0 393 aaPredicted RBP13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 SMIM7Q9BQ49 75 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 LINC00862A6NCI5 91 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 CTDSPLO15194 276 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 AKR1C3P42330 323 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 GUK1Q16774 197 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 NHLRC1Q6VVB1 395 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 OR51I2Q9H344 312 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 SSUH2Q9Y2M2 353 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 GSTZ1O43708 216 aaPredicted RBP13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 CBR3O75828 277 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 INHBBP09529 407 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 METTL15P1P0C7V9 234 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 TIAL1Q01085 375 aaKnown RBP eCLIP13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 C4orf17Q53FE4 359 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 SPANXN5Q5MJ07 72 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 CLEC9AQ6UXN8 241 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 THNSL2Q86YJ6 484 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 C4orf45Q96LM5 186 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms