RNA–Protein interactions for RNA: ENST00000530075.1

GMDS-206, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-206ENST00000530075 C1orf64Q8NEQ6 169 aa2.36□□□□□ -2.03
GMDS-206ENST00000530075 OR52E5Q8NH55 327 aa2.36□□□□□ -2.03
GMDS-206ENST00000530075 OR4K3Q96R72 315 aa2.36□□□□□ -2.03
GMDS-206ENST00000530075 FRMD8P1Q9BZ68 369 aaPredicted RBP2.36□□□□□ -2.03
GMDS-206ENST00000530075 CLN8Q9UBY8 286 aa2.36□□□□□ -2.03
GMDS-206ENST00000530075 RABL2BQ9UNT1 228 aa2.36□□□□□ -2.03
GMDS-206ENST00000530075 GAPVD1Q14C86 1478 aa2.36□□□□□ -2.03
GMDS-206ENST00000530075 IFT140Q96RY7 1462 aa2.36□□□□□ -2.03
GMDS-206ENST00000530075 BAZ2AQ9UIF9 1905 aaKnown RBP2.36□□□□□ -2.03
GMDS-206ENST00000530075 THADAQ6YHU6 1953 aa2.36□□□□□ -2.03
GMDS-206ENST00000530075 BRCA1P38398 1863 aaKnown RBP2.35□□□□□ -2.03
GMDS-206ENST00000530075 FANCD2Q9BXW9 1451 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 KIR2DS1A0A191URI9 304 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 TSPAN11A1L157 253 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 CTAGE15A4D2H0 777 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 CNMDO75829 334 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 RPN2P04844 631 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 HTR1DP28221 377 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 RAB9AP51151 201 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 UBE2E1P51965 193 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 RPS15AP62244 130 aaKnown RBP2.35□□□□□ -2.03
GMDS-206ENST00000530075 MEF2BQ02080 365 aaPredicted RBP2.35□□□□□ -2.03
GMDS-206ENST00000530075 RCN1Q15293 331 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 STUMQ69YW2 141 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 OPN5Q6U736 354 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 CASP12Q6UXS9 341 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 CTAGE6Q86UF2 777 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 MDP1Q86V88 176 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 PQLC3Q8N755 202 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 RXFP4Q8TDU9 374 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 MCUR1Q96AQ8 359 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 GPR82Q96P67 336 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 GSDMAQ96QA5 445 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 SHANK2-AS3Q9BTD1 123 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 RBFOX1Q9NWB1 397 aaKnown RBP2.35□□□□□ -2.03
GMDS-206ENST00000530075 ZNF391Q9UJN7 358 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 CARHSP1Q9Y2V2 147 aaKnown RBP2.35□□□□□ -2.03
GMDS-206ENST00000530075 LTBP4Q8N2S1 1624 aa2.35□□□□□ -2.03
GMDS-206ENST00000530075 SDK2Q58EX2 2172 aa2.34□□□□□ -2.03
GMDS-206ENST00000530075 CLASP1Q7Z460 1538 aa2.34□□□□□ -2.03
GMDS-206ENST00000530075 KIAA1671Q9BY89 1806 aa2.34□□□□□ -2.03
GMDS-206ENST00000530075 A0A1W2PNN7 141 aa2.34□□□□□ -2.03
GMDS-206ENST00000530075 CHMP2AO43633 222 aa2.34□□□□□ -2.03
GMDS-206ENST00000530075 SLC1A2P43004 574 aa2.34□□□□□ -2.03
GMDS-206ENST00000530075 PPICP45877 212 aa2.34□□□□□ -2.03
GMDS-206ENST00000530075 RPS11P62280 158 aaKnown RBP eCLIP2.34□□□□□ -2.03
GMDS-206ENST00000530075 ITIH4Q14624 930 aa2.34□□□□□ -2.03
GMDS-206ENST00000530075 LUZP6Q538Z0 58 aa2.34□□□□□ -2.03
GMDS-206ENST00000530075 TWF2Q6IBS0 349 aaKnown RBP2.34□□□□□ -2.03
GMDS-206ENST00000530075 CCDC148Q8NFR7 591 aa2.34□□□□□ -2.03
GMDS-206ENST00000530075 OR1L1Q8NH94 360 aa2.34□□□□□ -2.03
GMDS-206ENST00000530075 BPIFA3Q9BQP9 254 aa2.34□□□□□ -2.03
GMDS-206ENST00000530075 CCNB1IP1Q9NPC3 277 aa2.34□□□□□ -2.03
GMDS-206ENST00000530075 PRDM2Q13029 1718 aa2.34□□□□□ -2.04
GMDS-206ENST00000530075 ZCCHC6Q5VYS8 1495 aaKnown RBP2.33□□□□□ -2.04
GMDS-206ENST00000530075 ZNF608Q9ULD9 1512 aaPredicted RBP2.33□□□□□ -2.04
GMDS-206ENST00000530075 PEG3Q9GZU2 1588 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 A0A075B6Q4 140 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 KCNE1BA0A087WTH5 132 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 ANKRD65E5RJM6 399 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 ERI3O43414 337 aaKnown RBP2.33□□□□□ -2.04
GMDS-206ENST00000530075 SLC16A7O60669 478 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 RAD1O60671 282 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 FGFR1OPO95684 399 aaKnown RBP2.33□□□□□ -2.04
GMDS-206ENST00000530075 IGKV1D-16P01601 117 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 GLAP06280 429 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 TNFSF9P41273 254 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 FLI1Q01543 452 aaPredicted RBP2.33□□□□□ -2.04
GMDS-206ENST00000530075 BAMBIQ13145 260 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 MED27Q6P2C8 311 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 TMEM53Q6P2H8 277 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 PRSS54Q6PEW0 395 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 DEGS2Q6QHC5 323 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 TBPL2Q6SJ96 375 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 CD300LGQ6UXG3 332 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 BZW1Q7L1Q6 419 aaKnown RBP2.33□□□□□ -2.04
GMDS-206ENST00000530075 EIF3MQ7L2H7 374 aaKnown RBP2.33□□□□□ -2.04
GMDS-206ENST00000530075 ERO1BQ86YB8 467 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 ZNF547Q8IVP9 402 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 JAGN1Q8N5M9 183 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 DRAM1Q8N682 238 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 OR51F2Q8NH61 342 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 KCNS3Q9BQ31 491 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 CSNK1G1Q9HCP0 422 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 C20orf96Q9NUD7 363 aaPredicted RBP2.33□□□□□ -2.04
GMDS-206ENST00000530075 LRRC42Q9Y546 428 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 SVILO95425 2214 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 ZSWIM8A7E2V4 1837 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 ABCC10Q5T3U5 1492 aa2.33□□□□□ -2.04
GMDS-206ENST00000530075 URB2Q14146 1524 aaKnown RBP2.32□□□□□ -2.04
GMDS-206ENST00000530075 DIP2BQ9P265 1576 aa2.32□□□□□ -2.04
GMDS-206ENST00000530075 IGKV2-24A0A0C4DH68 120 aa2.32□□□□□ -2.04
GMDS-206ENST00000530075 M0R1X1 148 aa2.32□□□□□ -2.04
GMDS-206ENST00000530075 MFNGO00587 321 aa2.32□□□□□ -2.04
GMDS-206ENST00000530075 BCKDKO14874 412 aa2.32□□□□□ -2.04
GMDS-206ENST00000530075 SLC19A2O60779 497 aa2.32□□□□□ -2.04
GMDS-206ENST00000530075 FCN3O75636 299 aa2.32□□□□□ -2.04
GMDS-206ENST00000530075 HLA-HP01893 362 aa2.32□□□□□ -2.04
GMDS-206ENST00000530075 GSTM3P21266 225 aa2.32□□□□□ -2.04
GMDS-206ENST00000530075 PRKACBP22694 351 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms