RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SSX6Q7RTT6 188 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 PEG10Q86TG7 708 aaKnown RBP10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 KLBQ86Z14 1044 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 ENTHD1Q8IYW4 607 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 PACRGLQ8N7B6 248 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 SPERTQ8NA61 448 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 CSNK2A3Q8NEV1 391 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 OR10H4Q8NGA5 316 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 ZNF420Q8TAQ5 688 aaPredicted RBP10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 SIGLEC11Q96RL6 698 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 TBX5Q99593 518 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 PBOV1Q9GZY1 135 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 NPTNQ9Y639 398 aa10.69□□□□□ -0.7
CCDC90B-216ENST00000529856 ANK3Q12955 4377 aaKnown RBP10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 FN1P02751 2386 aaKnown RBP10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 MALRD1Q5VYJ5 2156 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 IGHV3-64DA0A0J9YX35 117 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 ERICH4A6NGS2 130 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 TMEM178BH3BS89 294 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 CASQ2O14958 399 aaPredicted RBP10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 PTBP3O95758 552 aaKnown RBP10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 TGFAP01135 160 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 IGHV2-70P01814 119 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 ZNF16P17020 682 aaPredicted RBP10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 PEX2P28328 305 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 RBMXP38159 391 aaKnown RBP10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 PMELP40967 661 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 ZNF85Q03923 595 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 ZNF181Q2M3W8 571 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 MOGAT3Q86VF5 341 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 LINC01356Q8N9X3 169 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 PLPP7Q8NBV4 271 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 ZNF555Q8NEP9 628 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 ITFG2Q969R8 447 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 ERGIC1Q969X5 290 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 PPP1R14AQ96A00 147 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 RNF166Q96A37 237 aaPredicted RBP10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 RNFT2Q96EX2 444 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 Q96MT0 163 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 ADAT1Q9BUB4 502 aaKnown RBP10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 DCLRE1BQ9H816 532 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 G6PC2Q9NQR9 355 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 NUFIP1Q9UHK0 495 aaKnown RBP10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 R4GMQ9 66 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 ZFHX3Q15911 3703 aa10.68□□□□□ -0.7
CCDC90B-216ENST00000529856 NF1P21359 2839 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 METTL15A6NJ78 407 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 FAM157AC9JC47 383 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 J3QRE1 110 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 SULT1C4O75897 302 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 IGLV3-1P01715 115 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 TTRP02766 147 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 KRT8P05787 483 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 ACKR3P25106 362 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 CDH15P55291 814 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 MFGE8Q08431 387 aaPredicted RBP10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 MZT1Q08AG7 82 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 MPPED2Q15777 294 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 SNCBQ16143 134 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 OGFRL1Q5TC84 451 aaPredicted RBP10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 FAM166AQ6J272 317 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 PLEKHG7Q6ZR37 379 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 KRT74Q7RTS7 529 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 LRRC28Q86X40 367 aaPredicted RBP10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 YIPF7Q8N8F6 280 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 Q8TCH9 128 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 DVL3Q92997 716 aaPredicted RBP10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 ZNF665Q9H7R5 613 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 TMEM160Q9NX00 188 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 OR52A1Q9UKL2 312 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 EXOGQ9Y2C4 368 aaKnown RBP10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 RHBDD3Q9Y3P4 386 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 PCDHGB1Q9Y5G3 927 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 SNX5Q9Y5X3 404 aa10.67□□□□□ -0.7
CCDC90B-216ENST00000529856 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.67□□□□□ -0.74e-7■■■■□ 26.6
CCDC90B-216ENST00000529856 ABCA2Q9BZC7 2435 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 ISPDA4D126 451 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 LRRC30A6NM36 301 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 B4DSR2 109 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 LOC110117498-PIK3R3F6TDL0 507 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 LMX1BO60663 402 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 RPP14O95059 124 aaKnown RBP10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 CYB5R3P00387 301 aaPredicted RBP10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 CST4P01036 141 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 IGHV2-5P01817 119 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 ATP6V1B1P15313 513 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 MAP2K3P46734 347 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 BTG1P62324 171 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 ACTC1P68032 377 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 ACTA1P68133 377 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 ZNF91Q05481 1191 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 ZMYND11Q15326 602 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 TMEM155Q4W5P6 130 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 PRAMEF6Q5VXH4 476 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 LIPNQ5VXI9 398 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 TTC23Q5W5X9 447 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 ELMOD2Q8IZ81 293 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 C1orf87Q8N0U7 546 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 FTMTQ8N4E7 242 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms