RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 UNC93AQ86WB7 457 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 VKORC1L1Q8N0U8 176 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 ZNF786Q8N393 782 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 RNF10Q8N5U6 811 aaKnown RBP2.92□□□□□ -1.94
C11orf88-204ENST00000529661 ZFP41Q8N8Y5 198 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 ZNF461Q8TAF7 563 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 ANKRD7Q92527 254 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 IL22RA2Q969J5 263 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 EXOSC8Q96B26 276 aaKnown RBP2.92□□□□□ -1.94
C11orf88-204ENST00000529661 ZNF799Q96GE5 643 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 ZFP3Q96NJ6 502 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 AGMATQ9BSE5 352 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 CHAC1Q9BUX1 264 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 CALN1Q9BXU9 219 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 POTEKPQ9BYX7 375 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 PORCNQ9H237 461 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 SAV1Q9H4B6 383 aaPredicted RBP2.92□□□□□ -1.94
C11orf88-204ENST00000529661 ISYNA1Q9NPH2 558 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 IMP3Q9NV31 184 aaKnown RBP2.92□□□□□ -1.94
C11orf88-204ENST00000529661 VAPAQ9P0L0 249 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 DUX4Q9UBX2 424 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 WSB1Q9Y6I7 421 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 RAD50Q92878 1312 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.91□□□□□ -1.94
C11orf88-204ENST00000529661 A0A096LNJ9 63 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 ANKRD20A5PA0PJZ0 165 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 HACD1B0YJ81 288 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 GATCO43716 136 aaKnown RBP2.91□□□□□ -1.94
C11orf88-204ENST00000529661 ALOX12BO75342 701 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 CATP04040 527 aaKnown RBP2.91□□□□□ -1.94
C11orf88-204ENST00000529661 ARG1P05089 322 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 SLC35E2BP0CK96 405 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 WARSP23381 471 aaKnown RBP2.91□□□□□ -1.94
C11orf88-204ENST00000529661 KDELR2P33947 212 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 UGT2B10P36537 528 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 VSX2P58304 361 aaPredicted RBP2.91□□□□□ -1.94
C11orf88-204ENST00000529661 C2orf80Q0P641 193 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 MAD2L1BPQ15013 274 aaPredicted RBP2.91□□□□□ -1.94
C11orf88-204ENST00000529661 QPRTQ15274 297 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 BCL2A1Q16548 175 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 MFSD14CQ5VZR4 134 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 ARL9Q6T311 187 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 FAM151BQ6UXP7 276 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 FBXW12Q6X9E4 464 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 SSX6Q7RTT6 188 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 CRLF3Q8IUI8 442 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 CDKL3Q8IVW4 592 aaPredicted RBP2.91□□□□□ -1.94
C11orf88-204ENST00000529661 C15orf56Q8N910 161 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 OR2Y1Q8NGV0 311 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 CCDC127Q96BQ5 260 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 GALNT14Q96FL9 552 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 ZNF681Q96N22 645 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 GPR21Q99679 349 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 FOXC2Q99958 501 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 C7orf50Q9BRJ6 194 aaKnown RBP2.91□□□□□ -1.94
C11orf88-204ENST00000529661 UTP23Q9BRU9 249 aaKnown RBP2.91□□□□□ -1.94
C11orf88-204ENST00000529661 CCDC94Q9BW85 323 aaPredicted RBP2.91□□□□□ -1.94
C11orf88-204ENST00000529661 SLC25A2Q9BXI2 301 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 SLC25A39Q9BZJ4 359 aaPredicted RBP2.91□□□□□ -1.94
C11orf88-204ENST00000529661 SHCBP1LQ9BZQ2 653 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 CHRNA10Q9GZZ6 450 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 TPK1Q9H3S4 243 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 WDR54Q9H977 334 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 SLC40A1Q9NP59 571 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 NAGKQ9UJ70 344 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 FHOD3Q2V2M9 1422 aa2.91□□□□□ -1.94
C11orf88-204ENST00000529661 SCN2AQ99250 2005 aa2.9□□□□□ -1.94
C11orf88-204ENST00000529661 MTCL1Q9Y4B5 1905 aaKnown RBP2.9□□□□□ -1.95
C11orf88-204ENST00000529661 IGHV3-74A0A0B4J1X5 117 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 IGHV3-66A0A0C4DH42 116 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 A6NDN8 102 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 FABP12A6NFH5 140 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 C11orf94C9JXX5 98 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 KLRC4-KLRK1H3BQV0 150 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 PLPP3O14495 311 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 TOX3O15405 576 aaPredicted RBP2.9□□□□□ -1.95
C11orf88-204ENST00000529661 SGCEO43556 437 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 TRAPPC6AO75865 159 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 FABP3P05413 133 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 GP1BAP07359 652 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 TLX1NBP0CAT3 122 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 RAB4AP20338 218 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 SYT1P21579 422 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 MAGEA6P43360 314 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 TSPAN5P62079 268 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 PON2Q15165 354 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 TAL2Q16559 108 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 NDUFAF6Q330K2 333 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 CDKL4Q5MAI5 379 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 DUPD1Q68J44 220 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 RWDD4Q6NW29 188 aaKnown RBP2.9□□□□□ -1.95
C11orf88-204ENST00000529661 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 LRRC6Q86X45 466 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 TMEM25Q86YD3 366 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 KRT222Q8N1A0 295 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 ZNF738Q8NE65 137 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 OR8J2Q8NGG1 315 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 RORBQ92753 470 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 CEP170P1Q96L14 293 aa2.9□□□□□ -1.95
C11orf88-204ENST00000529661 CIB1Q99828 191 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms