RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, human

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP98-215	ENST00000529063	ECSIT	Q9BQ95	431 aa		4.94	□□□□□ -1.62
NUP98-215	ENST00000529063	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.94	□□□□□ -1.62
NUP98-215	ENST00000529063	SYT4	Q9H2B2	425 aa		4.94	□□□□□ -1.62
NUP98-215	ENST00000529063	C16orf95	Q9H693	158 aa		4.94	□□□□□ -1.62
NUP98-215	ENST00000529063	ACOXL	Q9NUZ1	547 aa		4.94	□□□□□ -1.62
NUP98-215	ENST00000529063	RHCG	Q9UBD6	479 aa		4.94	□□□□□ -1.62
NUP98-215	ENST00000529063	DUX4	Q9UBX2	424 aa		4.94	□□□□□ -1.62
NUP98-215	ENST00000529063	BAG5	Q9UL15	447 aa		4.94	□□□□□ -1.62
NUP98-215	ENST00000529063	LHFPL6	Q9Y693	200 aa		4.94	□□□□□ -1.62
NUP98-215	ENST00000529063	DNAH7	Q8WXX0	4024 aa		4.94	□□□□□ -1.62
NUP98-215	ENST00000529063	C5orf63	A6NC05	138 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	HMX3	A6NHT5	357 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	LRRC30	A6NM36	301 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	EFCAB9	A8MZ26	197 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	SLC16A7	O60669	478 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	TSPAN9	O75954	239 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	CD14	P08571	375 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	FPR3	P25089	353 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	YAP1	P46937	504 aa	Known RBP	4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	RGS6	P49758	472 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	NPY4R	P50391	375 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	DLX1	P56177	255 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	LSM6	P62312	80 aa	Known RBP	4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	ELF3	P78545	371 aa	Predicted RBP	4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	PRB3	Q04118	309 aa	Predicted RBP	4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	ST3GAL3	Q11203	375 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	KRR1	Q13601	381 aa	Known RBP	4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	GK2	Q14410	553 aa	Predicted RBP	4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	LRRC23	Q53EV4	343 aa	Predicted RBP	4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	TTMP	Q5BVD1	217 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	CORO6	Q6QEF8	472 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	TBPL2	Q6SJ96	375 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	CFAP77	Q6ZQR2	320 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	TSEN54	Q7Z6J9	526 aa	Known RBP	4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	VTCN1	Q7Z7D3	282 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	OAF	Q86UD1	273 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	NAA40	Q86UY6	237 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	PDZD9	Q8IXQ8	264 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	C1orf87	Q8N0U7	546 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	TBC1D15	Q8TC07	691 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	CFHR4	Q92496	578 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	APOBEC3D	Q96AK3	386 aa	Predicted RBP	4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	MAGEB18	Q96M61	343 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	ZNF582	Q96NG8	517 aa	Predicted RBP	4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	TSSK2	Q96PF2	358 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	COQ7	Q99807	217 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	NUAK2	Q9H093	628 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	HDHD2	Q9H0R4	259 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	PNRC2	Q9NPJ4	139 aa	Known RBP	4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	UFSP2	Q9NUQ7	469 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	VSX1	Q9NZR4	365 aa	Predicted RBP	4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	ZNRD1	Q9P1U0	126 aa		4.93	□□□□□ -1.62
NUP98-215	ENST00000529063	SACS	Q9NZJ4	4579 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	IGLV1-36	A0A0B4J1U3	117 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	ZNF816-ZNF321P	A0A0X1KG74	233 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	LOC102723971	A0A1B0GUV8	181 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	HTR3E	A5X5Y0	456 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063		A6NLC8	198 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	FAM220BP	B1ANY3	271 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	LGALS8	O00214	317 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	ADAM20	O43506	726 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	AHCYL1	O43865	530 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	OR10H3	O60404	316 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	PTP4A3	O75365	173 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	PPP1R3D	O95685	299 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	IGHA1	P01876	353 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	PLA2G1B	P04054	148 aa	Known RBP	4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	ACSM4	P0C7M7	580 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	PSKH1	P11801	424 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	KDELR2	P33947	212 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	CDKN2A	P42771	156 aa	Known RBP	4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	GUCA1A	P43080	201 aa	Predicted RBP	4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	ARF6	P62330	175 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	TRAM2	Q15035	370 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	C2orf68	Q2NKX9	166 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	ANKDD1A	Q495B1	522 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	ZBED5	Q49AG3	693 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	METTL11B	Q5VVY1	283 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	SLC18B1	Q6NT16	456 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	MZT2B	Q6NZ67	158 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	ZNF826P	Q6ZT77	177 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	TMPRSS11F	Q6ZWK6	438 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	MBOAT2	Q6ZWT7	520 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	BTN2A1	Q7KYR7	527 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	VMO1	Q7Z5L0	202 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	WDR86	Q86TI4	376 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	GCSAM	Q8N6F7	178 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	SLC26A10	Q8NG04	563 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	OR8J3	Q8NGG0	315 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	OR5L1	Q8NGL2	311 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	ERGIC1	Q969X5	290 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	TPD52L3	Q96J77	140 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	GPX7	Q96SL4	187 aa	Predicted RBP	4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	SPATA25	Q9BR10	227 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	TRIM15	Q9C019	465 aa		4.92	□□□□□ -1.62
NUP98-215	ENST00000529063	RABEP2	Q9H5N1	569 aa		4.92	□□□□□ -1.62

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