RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 FOXRED2Q8IWF2 684 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 GPALPP1Q8IXQ4 340 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 GTPBP8Q8N3Z3 284 aaPredicted RBP3.67□□□□□ -1.82
CD44-226ENST00000527889 NPEPL1Q8NDH3 523 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 MDS2Q8NDY4 140 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 FAM83FQ8NEG4 500 aaPredicted RBP3.67□□□□□ -1.82
CD44-226ENST00000527889 DNAAF1Q8NEP3 725 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 OR2M7Q8NG81 312 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 OR14L1PQ8NHC6 308 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 MFSD8Q8NHS3 518 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 C9orf43Q8TAL5 461 aaPredicted RBP3.67□□□□□ -1.82
CD44-226ENST00000527889 Q8TCH9 128 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 TSEN15Q8WW01 171 aaKnown RBP3.67□□□□□ -1.82
CD44-226ENST00000527889 ZNRF4Q8WWF5 429 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 ISOC1Q96CN7 298 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 ZMYND19Q96E35 227 aaPredicted RBP3.67□□□□□ -1.82
CD44-226ENST00000527889 TMEM80Q96HE8 168 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 TXNDC15Q96J42 360 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 FOXN4Q96NZ1 517 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 AGAP4Q96P64 663 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 TSSK2Q96PF2 358 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 OR5M11Q96RB7 305 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 GPX7Q96SL4 187 aaPredicted RBP3.67□□□□□ -1.82
CD44-226ENST00000527889 NMNAT3Q96T66 252 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 FAM173AQ9BQD7 235 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 ABHD14AQ9BUJ0 271 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 SCNM1Q9BWG6 230 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 POTEKPQ9BYX7 375 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 TTTY10Q9BZA0 68 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 YIPF3Q9GZM5 350 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 RERGLQ9H628 205 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 FGF20Q9NP95 211 aaPredicted RBP3.67□□□□□ -1.82
CD44-226ENST00000527889 CHST11Q9NPF2 352 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 ASB6Q9NWX5 421 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 MED29Q9NX70 200 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 TAS2R5Q9NYW4 299 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 WARS2Q9UGM6 360 aaKnown RBP3.67□□□□□ -1.82
CD44-226ENST00000527889 DIMT1Q9UNQ2 313 aaKnown RBP3.67□□□□□ -1.82
CD44-226ENST00000527889 SLC6A5Q9Y345 797 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 SPIN1Q9Y657 262 aaPredicted RBP3.67□□□□□ -1.82
CD44-226ENST00000527889 CEPT1Q9Y6K0 416 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 WNK2Q9Y3S1 2297 aa3.67□□□□□ -1.82
CD44-226ENST00000527889 DSCAMO60469 2012 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 ANKHD1Q8IWZ3 2542 aaKnown RBP3.66□□□□□ -1.82
CD44-226ENST00000527889 PNMA8CA0A1B0GUJ8 204 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 A0A1W2PN81 502 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 A0A1W2PRG6 482 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 OR5H15A6NDH6 313 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 TVP23AA6NH52 213 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 USP17L23D6RBM5 183 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 NPIPA5E9PKD4 350 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 H0YIZ8 118 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 H3BMQ9 156 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 SULT2B1O00204 365 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 DCTN6O00399 190 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 XKRYO14609 159 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 TNFSF11O14788 317 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 MYL12BO14950 172 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 ARPC3O15145 178 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 MAGEB4O15481 346 aaPredicted RBP3.66□□□□□ -1.82
CD44-226ENST00000527889 SEC14L5O43304 696 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 OR2T1O43869 369 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 NME2P1O60361 137 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 SELENOFO60613 162 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 MRPS14O60783 128 aaKnown RBP3.66□□□□□ -1.82
CD44-226ENST00000527889 RAB3DO95716 219 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 TXNDC12O95881 172 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 RENP00797 406 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 MBP02144 154 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 TFP02787 698 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 SP1P08047 785 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 ACAA1P09110 424 aaPredicted RBP3.66□□□□□ -1.82
CD44-226ENST00000527889 LIMS3P0CW19 117 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 LIMS4P0CW20 117 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 FCGR2AP12318 317 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 CD36P16671 472 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 SPI1P17947 270 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 MYL12AP19105 171 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 GADD45AP24522 165 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 DCKP27707 260 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 CDAP32320 146 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 CHRNA7P36544 502 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 TGFBR1P36897 503 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 TGFBR2P37173 567 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 CAMPP49913 170 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 P2RY4P51582 365 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 SUCLG1P53597 346 aaKnown RBP3.66□□□□□ -1.82
CD44-226ENST00000527889 CLDN20P56880 219 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 RPL27P61353 136 aaKnown RBP3.66□□□□□ -1.82
CD44-226ENST00000527889 LSM3P62310 102 aaKnown RBP3.66□□□□□ -1.82
CD44-226ENST00000527889 ARG2P78540 354 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 HSF1Q00613 529 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 PLGLB1Q02325 96 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 POU3F1Q03052 451 aaPredicted RBP3.66□□□□□ -1.82
CD44-226ENST00000527889 FMODQ06828 376 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 PUDPQ08623 228 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 RAB40BQ12829 278 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 MFAP5Q13361 173 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 AQP6Q13520 282 aa3.66□□□□□ -1.82
CD44-226ENST00000527889 MFSD13AQ14CX5 517 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms