RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 RPA2P15927 270 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 PPP3CBP16298 524 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 OR3A4PP47883 348 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 B3GALT5-AS1P59052 145 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 MRPS34P82930 218 aaKnown RBP13.5□□□□□ -0.25
USH1C-207ENST00000527720 OC90Q02509 493 aaPredicted RBP13.5□□□□□ -0.25
USH1C-207ENST00000527720 ACTBL2Q562R1 376 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 LY6G6FQ5SQ64 297 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 ZNF468Q5VIY5 522 aaPredicted RBP13.5□□□□□ -0.25
USH1C-207ENST00000527720 NAXDQ8IW45 347 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 GVQW1Q8N7I0 195 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 STEAP2Q8NFT2 490 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 OR5M8Q8NGP6 311 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 RAB3CQ96E17 227 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 SPACA5Q96QH8 159 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 GPER1Q99527 375 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 RBM24Q9BX46 236 aaKnown RBP13.5□□□□□ -0.25
USH1C-207ENST00000527720 ULBP2Q9BZM5 246 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 VSIG4Q9Y279 399 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 FXYD6-FXYD2A0A087WZ82 144 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 SSX5O60225 188 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 MPIG6BO95866 241 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 IL2RAP01589 272 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 HIST1H1DP16402 221 aaKnown RBP13.5□□□□□ -0.25
USH1C-207ENST00000527720 HLA-GP17693 338 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 CD34P28906 385 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 HRH1P35367 487 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 SSPNQ14714 243 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 HLXQ14774 488 aaPredicted RBP13.5□□□□□ -0.25
USH1C-207ENST00000527720 NKPD1Q17RQ9 610 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 FAM27BQ5VT28 67 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 DBX2Q6ZNG2 339 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 LYG2Q86SG7 212 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 LYZL4Q96KX0 146 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 NICN1Q9BSH3 213 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 FXYD6Q9H0Q3 95 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 CST11Q9H112 138 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 FBXO4Q9UKT5 387 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 MRPS18CQ9Y3D5 142 aaKnown RBP13.5□□□□□ -0.25
USH1C-207ENST00000527720 A0A0A6YYD4 124 aa13.49□□□□□ -0.25
USH1C-207ENST00000527720 IGKV1-9A0A0C4DH69 117 aa13.49□□□□□ -0.25
USH1C-207ENST00000527720 MTRF1O75570 445 aaKnown RBP13.49□□□□□ -0.25
USH1C-207ENST00000527720 HLA-AP01891 365 aaKnown RBP13.49□□□□□ -0.25
USH1C-207ENST00000527720 IFNA6P05013 189 aa13.49□□□□□ -0.25
USH1C-207ENST00000527720 ANOS1P23352 680 aa13.49□□□□□ -0.25
USH1C-207ENST00000527720 ZBTB25P24278 435 aa13.49□□□□□ -0.25
USH1C-207ENST00000527720 AGTR1P30556 359 aa13.49□□□□□ -0.25
USH1C-207ENST00000527720 HOXD11P31277 338 aaPredicted RBP13.49□□□□□ -0.25
USH1C-207ENST00000527720 CD96P40200 585 aa13.49□□□□□ -0.25
USH1C-207ENST00000527720 CBX5P45973 191 aa13.49□□□□□ -0.25
USH1C-207ENST00000527720 AP2S1P53680 142 aaPredicted RBP13.49□□□□□ -0.25
USH1C-207ENST00000527720 GFOD2Q3B7J2 385 aa13.49□□□□□ -0.25
USH1C-207ENST00000527720 OR52W1Q6IF63 320 aa13.49□□□□□ -0.25
USH1C-207ENST00000527720 LIN54Q6MZP7 749 aa13.49□□□□□ -0.25
USH1C-207ENST00000527720 C6orf15Q6UXA7 325 aaPredicted RBP13.49□□□□□ -0.25
USH1C-207ENST00000527720 TMEM104Q8NE00 496 aa13.49□□□□□ -0.25
USH1C-207ENST00000527720 SPTSSAQ969W0 71 aa13.49□□□□□ -0.25
USH1C-207ENST00000527720 SRXN1Q9BYN0 137 aa13.49□□□□□ -0.25
USH1C-207ENST00000527720 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.49□□□□□ -0.25
USH1C-207ENST00000527720 MYO7BQ6PIF6 2116 aa13.49□□□□□ -0.25
USH1C-207ENST00000527720 SDK2Q58EX2 2172 aa13.49□□□□□ -0.25
USH1C-207ENST00000527720 OR5H15A6NDH6 313 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 E9PLN8 166 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 F5H5K5 113 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 SMAD9O15198 467 aaKnown RBP13.48□□□□□ -0.25
USH1C-207ENST00000527720 TPD52L2O43399 206 aaKnown RBP13.48□□□□□ -0.25
USH1C-207ENST00000527720 B3GALNT1O75752 331 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 CSN2P05814 226 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 RRASP10301 218 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 SLC6A9P48067 706 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 RNF144BQ7Z419 303 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 FAM89BQ8N5H3 189 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 MRGPRFQ96AM1 343 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 CHST5Q9GZS9 411 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 LOXL2Q9Y4K0 774 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 M0R135 149 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 CALCRP30988 508 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 OTX2P32243 289 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 KISS1Q15726 138 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 VAX1Q5SQQ9 334 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 COMMD7Q86VX2 200 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 CCDC28AQ8IWP9 274 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 GPR137CQ8N3F9 429 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 LRRC18Q8N456 261 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 OR4K15Q8NH41 348 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 ZNF799Q96GE5 643 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 OCSTAMPQ9BR26 566 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 ARL6Q9H0F7 186 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 ZNF224Q9NZL3 707 aa13.48□□□□□ -0.25
USH1C-207ENST00000527720 NOP16Q9Y3C1 178 aaKnown RBP13.48□□□□□ -0.25
USH1C-207ENST00000527720 DHRS7CA6NNS2 312 aa13.47□□□□□ -0.25
USH1C-207ENST00000527720 MFNGO00587 321 aa13.47□□□□□ -0.25
USH1C-207ENST00000527720 SOCS1O15524 211 aa13.47□□□□□ -0.25
USH1C-207ENST00000527720 CRTAPO75718 401 aaPredicted RBP13.47□□□□□ -0.25
USH1C-207ENST00000527720 NAT2P11245 290 aa13.47□□□□□ -0.25
USH1C-207ENST00000527720 TCN2P20062 427 aa13.47□□□□□ -0.25
USH1C-207ENST00000527720 PTGFRP43088 359 aa13.47□□□□□ -0.25
USH1C-207ENST00000527720 TMEM50BP56557 158 aa13.47□□□□□ -0.25
USH1C-207ENST00000527720 TAS2R31P59538 309 aa13.47□□□□□ -0.25
USH1C-207ENST00000527720 RPS27AP62979 156 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms