RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 KRCC1Q9NPI7 259 aaPredicted RBP3.73□□□□□ -1.81
CD44-213ENST00000525209 ABCC13Q9NSE7 274 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 ZNF446Q9NWS9 450 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 TAS2R16Q9NYV7 291 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 TREM2Q9NZC2 230 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 GLTPQ9NZD2 209 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 CIDEBQ9UHD4 219 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 CD84Q9UIB8 345 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 FBXO5Q9UKT4 447 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 TP53TG1Q9Y2A0 90 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 KLF12Q9Y4X4 402 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 OR51B4Q9Y5P0 310 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 PIK3C2AO00443 1686 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 COL5A2P05997 1499 aaPredicted RBP3.73□□□□□ -1.81
CD44-213ENST00000525209 WDR90Q96KV7 1748 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 ANKARQ7Z5J8 1434 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 CEP350Q5VT06 3117 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 TULP4Q9NRJ4 1543 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 IGLV3-22A0A075B6J6 115 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 ZNF816-ZNF321PA0A0X1KG74 233 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 VPS37CA5D8V6 355 aaPredicted RBP3.72□□□□□ -1.81
CD44-213ENST00000525209 M0QZK8 103 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 NME4O00746 187 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 ADAM10O14672 748 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 NUPL2O15504 423 aaKnown RBP3.72□□□□□ -1.81
CD44-213ENST00000525209 SPRY3O43610 288 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 ZG16O60844 167 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 FKBP6O75344 327 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 MED6O75586 246 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 OR2B3O76000 313 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 SLC22A5O76082 557 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 LINC00271P0C7V0 271 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 RNF224P0DH78 156 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 HLA-DOBP13765 273 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 RAB5AP20339 215 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 GRPRP30550 384 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 RPA3P35244 121 aaPredicted RBP3.72□□□□□ -1.81
CD44-213ENST00000525209 ARL2P36404 184 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 IFNGR2P38484 337 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 AMTP48728 403 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 SLURP1P55000 103 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 RPL18AQ02543 176 aaKnown RBP3.72□□□□□ -1.81
CD44-213ENST00000525209 BCL2L1Q07817 233 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 ECH1Q13011 328 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 OR2F1Q13607 317 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 FAM53BQ14153 422 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 SLC1A5Q15758 541 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 CYP51A1Q16850 503 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 MS4A13Q5J8X5 152 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 FHL5Q5TD97 284 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 CST9Q5W186 159 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 PRSS41Q7RTY9 318 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 CBLN2Q8IUK8 224 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 SVOPLQ8N434 492 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 NATD1Q8N6N6 113 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 ACOT4Q8N9L9 421 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 OR8G5Q8NG78 346 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 OR5AR1Q8NGP9 310 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 RPLP0P6Q8NHW5 317 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 FNDC8Q8TC99 324 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 RCN3Q96D15 328 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 TCEAL4Q96EI5 215 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 URB1-AS1Q96HZ7 61 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 OR10C1Q96KK4 312 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 C2orf48Q96LS8 159 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 ZNF597Q96LX8 424 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 COL21A1Q96P44 957 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 ZIM3Q96PE6 472 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 PSMB7Q99436 277 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 VAT1Q99536 393 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 GABRG3Q99928 467 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 RASL11BQ9BPW5 248 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 DHRS9Q9BPW9 319 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 MRPL45Q9BRJ2 306 aaKnown RBP3.72□□□□□ -1.81
CD44-213ENST00000525209 OSBPL11Q9BXB4 747 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 CSTL1Q9H114 145 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 TPK1Q9H3S4 243 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 PRORYQ9H606 182 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 REEP1Q9H902 201 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 ADGRL4Q9HBW9 690 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 AMBNQ9NP70 447 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 AURKAIP1Q9NWT8 199 aaPredicted RBP3.72□□□□□ -1.81
CD44-213ENST00000525209 SEC14L4Q9UDX3 406 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 CES1P1Q9UKY3 287 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 HHLA2Q9UM44 414 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 ALG5Q9Y673 324 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 RFX7Q2KHR2 1363 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 ATP7BP35670 1465 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 TUBGCP6Q96RT7 1819 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 WNK3Q9BYP7 1800 aa3.72□□□□□ -1.81
CD44-213ENST00000525209 RGPD3A6NKT7 1758 aaPredicted RBP3.71□□□□□ -1.81
CD44-213ENST00000525209 LTN1O94822 1766 aa3.71□□□□□ -1.81
CD44-213ENST00000525209 RGPD4Q7Z3J3 1758 aa3.71□□□□□ -1.81
CD44-213ENST00000525209 UTRNP46939 3433 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 CENPVL3A0A0U1RRI6 287 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 FAM166BA8MTA8 275 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 K7EMT4 169 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 SULT2B1O00204 365 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 FABP7O15540 132 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 BUB3O43684 328 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms