RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 ZMAT1Q5H9K5 638 aa10.55□□□□□ -0.72
SMCO4-202ENST00000525141 OR2T2Q6IF00 324 aa10.55□□□□□ -0.72
SMCO4-202ENST00000525141 LRRN1Q6UXK5 716 aa10.55□□□□□ -0.72
SMCO4-202ENST00000525141 ZNF771Q7L3S4 317 aaPredicted RBP10.55□□□□□ -0.72
SMCO4-202ENST00000525141 PRSS45Q7RTY3 260 aa10.55□□□□□ -0.72
SMCO4-202ENST00000525141 KRT77Q7Z794 578 aa10.55□□□□□ -0.72
SMCO4-202ENST00000525141 LRRC28Q86X40 367 aaPredicted RBP10.55□□□□□ -0.72
SMCO4-202ENST00000525141 ZNF679Q8IYX0 411 aa10.55□□□□□ -0.72
SMCO4-202ENST00000525141 OR5AS1Q8N127 324 aa10.55□□□□□ -0.72
SMCO4-202ENST00000525141 OR2Z1Q8NG97 314 aa10.55□□□□□ -0.72
SMCO4-202ENST00000525141 OR52H1Q8NGJ2 320 aa10.55□□□□□ -0.72
SMCO4-202ENST00000525141 OR51G2Q8NGK0 314 aa10.55□□□□□ -0.72
SMCO4-202ENST00000525141 ITLN1Q8WWA0 313 aa10.55□□□□□ -0.72
SMCO4-202ENST00000525141 OR8B4Q96RC9 309 aa10.55□□□□□ -0.72
SMCO4-202ENST00000525141 REPIN1Q9BWE0 567 aaKnown RBP10.55□□□□□ -0.72
SMCO4-202ENST00000525141 MMP26Q9NRE1 261 aa10.55□□□□□ -0.72
SMCO4-202ENST00000525141 TMEM106BQ9NUM4 274 aa10.55□□□□□ -0.72
SMCO4-202ENST00000525141 TENM1Q9UKZ4 2725 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 A0A1B0GWJ7 208 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 C5orf63A6NC05 138 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 TRAPPC2LH3BP13 241 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 MLNRO43193 412 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 XRCC2O43543 280 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 TCF21O43680 179 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 CX3CR1P49238 355 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 PRSS12P56730 875 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 CXCR4P61073 352 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 EGR3Q06889 387 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 IL18R1Q13478 541 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 SNAI3Q3KNW1 292 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 ZNF691Q5VV52 312 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 ZNF322Q6U7Q0 402 aaPredicted RBP10.54□□□□□ -0.72
SMCO4-202ENST00000525141 PGAP1Q75T13 922 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 OR8G5Q8NG78 346 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 NRG4Q8WWG1 115 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 CYGBQ8WWM9 190 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 SPSB4Q96A44 273 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 OPA3Q9H6K4 179 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 GCM1Q9NP62 436 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 IL19Q9UHD0 177 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 COPS3Q9UNS2 423 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 EXOGQ9Y2C4 368 aaKnown RBP10.54□□□□□ -0.72
SMCO4-202ENST00000525141 LRP12Q9Y561 859 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 PCDHGB1Q9Y5G3 927 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 HSPE1-MOB4S4R3N1 261 aa10.54□□□□□ -0.72
SMCO4-202ENST00000525141 IQCF6A8MYZ5 107 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 TMEM178BH3BS89 294 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 J3QRE1 110 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 PNPP00491 289 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 ANXA2P07355 339 aaKnown RBP10.53□□□□□ -0.72
SMCO4-202ENST00000525141 ADRA2CP18825 462 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 PCMT1P22061 227 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 RIDAP52758 137 aaKnown RBP10.53□□□□□ -0.72
SMCO4-202ENST00000525141 ZNF121P58317 390 aaPredicted RBP10.53□□□□□ -0.72
SMCO4-202ENST00000525141 ISL1P61371 349 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 SEC61A1P61619 476 aaKnown RBP10.53□□□□□ -0.72
SMCO4-202ENST00000525141 LCN2P80188 198 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 ZNF92Q03936 586 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 ZMYND11Q15326 602 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 LIPNQ5VXI9 398 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 EGFL6Q8IUX8 553 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 SETD9Q8NE22 299 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 SEMA6DQ8NFY4 1073 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 ZNF420Q8TAQ5 688 aaPredicted RBP10.53□□□□□ -0.72
SMCO4-202ENST00000525141 ITFG2Q969R8 447 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 SGK3Q96BR1 496 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 RNFT2Q96EX2 444 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 TIMD4Q96H15 378 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 OR2V2Q96R30 315 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 SLC30A2Q9BRI3 323 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 ADI1Q9BV57 179 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 RGCCQ9H4X1 137 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 PATZ1Q9HBE1 687 aaKnown RBP10.53□□□□□ -0.72
SMCO4-202ENST00000525141 TMEM165Q9HC07 324 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 MRPS18AQ9NVS2 196 aaKnown RBP10.53□□□□□ -0.72
SMCO4-202ENST00000525141 AASSQ9UDR5 926 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 ZNF391Q9UJN7 358 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 ANK2Q01484 3957 aa10.53□□□□□ -0.72
SMCO4-202ENST00000525141 A0A1W2PQL4 384 aaPredicted RBP10.52□□□□□ -0.73
SMCO4-202ENST00000525141 PRR32B1ATL7 298 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 WBP4O75554 376 aaKnown RBP10.52□□□□□ -0.73
SMCO4-202ENST00000525141 SULT1C4O75897 302 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 FSHBP01225 129 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 WNT2P09544 360 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 SLC2A1P11166 492 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 CFL1P23528 166 aaKnown RBP10.52□□□□□ -0.73
SMCO4-202ENST00000525141 DDOSTP39656 456 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 CAPGP40121 348 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 MMP16P51512 607 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 PSMA6P60900 246 aaKnown RBP10.52□□□□□ -0.73
SMCO4-202ENST00000525141 ACTC1P68032 377 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 ACTA1P68133 377 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 IL5RAQ01344 420 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 SLC3A1Q07837 685 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 MAB21L1Q13394 359 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 TUSC1Q2TAM9 212 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 KLHL22Q53GT1 634 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 GLYATL3Q5SZD4 288 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 ZNF684Q5T5D7 378 aa10.52□□□□□ -0.73
SMCO4-202ENST00000525141 PLEKHG7Q6ZR37 379 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms