RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 ZNRF4Q8WWF5 429 aa9.15□□□□□ -0.94
PVT1-216ENST00000523068 SLAMF6Q96DU3 332 aa9.15□□□□□ -0.94
PVT1-216ENST00000523068 PLEKHA8Q96JA3 519 aa9.15□□□□□ -0.94
PVT1-216ENST00000523068 HRASLS5Q96KN8 279 aa9.15□□□□□ -0.94
PVT1-216ENST00000523068 KCNJ15Q99712 375 aa9.15□□□□□ -0.94
PVT1-216ENST00000523068 MRI1Q9BV20 369 aa9.15□□□□□ -0.94
PVT1-216ENST00000523068 NMNAT2Q9BZQ4 307 aa9.15□□□□□ -0.94
PVT1-216ENST00000523068 ZNF696Q9H7X3 374 aa9.15□□□□□ -0.94
PVT1-216ENST00000523068 SP140LQ9H930 580 aa9.15□□□□□ -0.94
PVT1-216ENST00000523068 CMC2Q9NRP2 79 aa9.15□□□□□ -0.94
PVT1-216ENST00000523068 CENPMQ9NSP4 180 aa9.15□□□□□ -0.94
PVT1-216ENST00000523068 PPIAL4AQ9Y536 164 aa9.15□□□□□ -0.94
PVT1-216ENST00000523068 STAB1Q9NY15 2570 aa9.15□□□□□ -0.95
PVT1-216ENST00000523068 GGT3PA6NGU5 568 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 CD300LBA8K4G0 201 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 TRAPPC2LH3BP13 241 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 XRCC2O43543 280 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 GMDSO60547 372 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 APOC1P02654 83 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 WNT2P09544 360 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 RPS2P15880 293 aaKnown RBP9.14□□□□□ -0.95
PVT1-216ENST00000523068 ZNF12P17014 697 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 PAICSP22234 425 aaKnown RBP9.14□□□□□ -0.95
PVT1-216ENST00000523068 HSD11B1P28845 292 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 GRK5P34947 590 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 POLR2IP36954 125 aaKnown RBP9.14□□□□□ -0.95
PVT1-216ENST00000523068 GNB2P62879 340 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 GRB2P62993 217 aaKnown RBP9.14□□□□□ -0.95
PVT1-216ENST00000523068 ZNF92Q03936 586 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 MZT1Q08AG7 82 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 HNRNPA0Q13151 305 aaKnown RBP9.14□□□□□ -0.95
PVT1-216ENST00000523068 MAB21L1Q13394 359 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 OR8G1Q15617 311 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 KCNJ8Q15842 424 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 SNAI3Q3KNW1 292 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 KCTD21Q4G0X4 260 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 RBM48Q5RL73 367 aaKnown RBP9.14□□□□□ -0.95
PVT1-216ENST00000523068 LYPD4Q6UWN0 246 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 KLBQ86Z14 1044 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.14□□□□□ -0.95
PVT1-216ENST00000523068 SPERTQ8NA61 448 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 ZNF511Q8NB15 262 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 PLPP7Q8NBV4 271 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 DEFB108BQ8NET1 73 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 Q8TCH9 128 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 FAM216AQ8WUB2 273 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 NEIL1Q96FI4 390 aaPredicted RBP9.14□□□□□ -0.95
PVT1-216ENST00000523068 ADAT1Q9BUB4 502 aaKnown RBP9.14□□□□□ -0.95
PVT1-216ENST00000523068 SSBP3Q9BWW4 388 aaPredicted RBP9.14□□□□□ -0.95
PVT1-216ENST00000523068 TMEM165Q9HC07 324 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 MMP26Q9NRE1 261 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 SCN3BQ9NY72 215 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 MRPL15Q9P015 296 aaKnown RBP9.14□□□□□ -0.95
PVT1-216ENST00000523068 OPN4Q9UHM6 478 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 INSIG2Q9Y5U4 225 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 AUP1Q9Y679 476 aa9.14□□□□□ -0.95
PVT1-216ENST00000523068 FBN3Q75N90 2809 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.13□□□□□ -0.95
PVT1-216ENST00000523068 ZAR1LA6NP61 321 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 RGS9O75916 674 aaPredicted RBP9.13□□□□□ -0.95
PVT1-216ENST00000523068 ZNF205O95201 554 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 FSHBP01225 129 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 CLUP10909 449 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 CA6P23280 308 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 RBMXP38159 391 aaKnown RBP9.13□□□□□ -0.95
PVT1-216ENST00000523068 DDOSTP39656 456 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 PRKXP51817 358 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 PRSS12P56730 875 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 SEC61A1P61619 476 aaKnown RBP9.13□□□□□ -0.95
PVT1-216ENST00000523068 ACTG1P63261 375 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 CSNK2BP67870 215 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 PTGES3Q15185 160 aaKnown RBP9.13□□□□□ -0.95
PVT1-216ENST00000523068 ZNF404Q494X3 552 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 GLYATL3Q5SZD4 288 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 SLX4IPQ5VYV7 408 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 BTNL3Q6UXE8 466 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 C12orf54Q6X4T0 127 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 RBMS3Q6XE24 437 aaKnown RBP9.13□□□□□ -0.95
PVT1-216ENST00000523068 RHOUQ7L0Q8 258 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 SHFQ7M4L6 423 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 OR8B3Q8NGG8 313 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 OR2AE1Q8NHA4 323 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 OTULINQ96BN8 352 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 OR8B2Q96RD0 313 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 INTS14Q96SY0 518 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 SLC6A7Q99884 636 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 TMEM246Q9BRR3 403 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 MRPS26Q9BYN8 205 aaKnown RBP9.13□□□□□ -0.95
PVT1-216ENST00000523068 FN3KRPQ9HA64 309 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 SLC25A19Q9HC21 320 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 VCX3AQ9NNX9 186 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 TRIM36Q9NQ86 728 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 NUP50Q9UKX7 468 aa9.13□□□□□ -0.95
PVT1-216ENST00000523068 A0A087WXM4 84 aa9.12□□□□□ -0.95
PVT1-216ENST00000523068 IGHV3-64DA0A0J9YX35 117 aa9.12□□□□□ -0.95
PVT1-216ENST00000523068 PRR23D1E9PI22 279 aaPredicted RBP9.12□□□□□ -0.95
PVT1-216ENST00000523068 FAM20BO75063 409 aa9.12□□□□□ -0.95
PVT1-216ENST00000523068 GLCEO94923 617 aa9.12□□□□□ -0.95
PVT1-216ENST00000523068 HMGN1P05114 100 aa9.12□□□□□ -0.95
PVT1-216ENST00000523068 PRR23D2P0DMB1 279 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms