RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 TMEM186Q96B77 213 aa14.99□□□□□ -0.01
CLK4-211ENST00000522556 OPA3Q9H6K4 179 aa14.99□□□□□ -0.01
CLK4-211ENST00000522556 HIF1ANQ9NWT6 349 aa14.99□□□□□ -0.01
CLK4-211ENST00000522556 TMEM160Q9NX00 188 aa14.99□□□□□ -0.01
CLK4-211ENST00000522556 IMPAD1Q9NX62 359 aa14.99□□□□□ -0.01
CLK4-211ENST00000522556 WARS2Q9UGM6 360 aaKnown RBP14.99□□□□□ -0.01
CLK4-211ENST00000522556 ORC6Q9Y5N6 252 aa14.99□□□□□ -0.01
CLK4-211ENST00000522556 SVEP1Q4LDE5 3571 aa14.99□□□□□ -0.01
CLK4-211ENST00000522556 TMEM269A0A1B0GVZ9 245 aa14.98□□□□□ -0.01
CLK4-211ENST00000522556 A0A1W2PQL4 384 aaPredicted RBP14.98□□□□□ -0.01
CLK4-211ENST00000522556 GABRB1P18505 474 aa14.98□□□□□ -0.01
CLK4-211ENST00000522556 ZFP36P26651 326 aaKnown RBP14.98□□□□□ -0.01
CLK4-211ENST00000522556 CSNK2BP67870 215 aa14.98□□□□□ -0.01
CLK4-211ENST00000522556 LPCAT4Q643R3 524 aa14.98□□□□□ -0.01
CLK4-211ENST00000522556 KCTD18Q6PI47 426 aaPredicted RBP14.98□□□□□ -0.01
CLK4-211ENST00000522556 PEG10Q86TG7 708 aaKnown RBP14.98□□□□□ -0.01
CLK4-211ENST00000522556 LRRC28Q86X40 367 aaPredicted RBP14.98□□□□□ -0.01
CLK4-211ENST00000522556 ASB17Q8WXJ9 295 aa14.98□□□□□ -0.01
CLK4-211ENST00000522556 PAPOLGQ9BWT3 736 aaKnown RBP14.98□□□□□ -0.01
CLK4-211ENST00000522556 MROQ9BYG7 248 aa14.98□□□□□ -0.01
CLK4-211ENST00000522556 PBOV1Q9GZY1 135 aa14.98□□□□□ -0.01
CLK4-211ENST00000522556 SHARPINQ9H0F6 387 aa14.98□□□□□ -0.01
CLK4-211ENST00000522556 METTL17Q9H7H0 456 aaPredicted RBP14.98□□□□□ -0.01
CLK4-211ENST00000522556 NIPAL2Q9H841 368 aa14.98□□□□□ -0.01
CLK4-211ENST00000522556 ANKRD30BLA7E2S9 258 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 CEACAM18A8MTB9 384 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 ZNF670-ZNF695F2Z2N8 137 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 PTBP3O95758 552 aaKnown RBP14.97□□□□□ -0.01
CLK4-211ENST00000522556 AVPP01185 164 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 IGLV3-1P01715 115 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 TTRP02766 147 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 GRPP07492 148 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 EGR1P18146 543 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 CD80P33681 288 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 RIDAP52758 137 aaKnown RBP14.97□□□□□ -0.01
CLK4-211ENST00000522556 LCN2P80188 198 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 ZNF85Q03923 595 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 RCN1Q15293 331 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 LRRC36Q1X8D7 754 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 ZNF684Q5T5D7 378 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 C1orf229Q6ZS94 237 aaPredicted RBP14.97□□□□□ -0.01
CLK4-211ENST00000522556 GLCCI1Q86VQ1 547 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 ENTHD1Q8IYW4 607 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 OR10H4Q8NGA5 316 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 OR51F2Q8NH61 342 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 OR51E1Q8TCB6 317 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 Q8TCH9 128 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 HPSE2Q8WWQ2 592 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 STMN2Q93045 179 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 RAB39BQ96DA2 213 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 FAM71F1Q96KD3 344 aaPredicted RBP14.97□□□□□ -0.01
CLK4-211ENST00000522556 BEX2Q9BXY8 128 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 G6PC2Q9NQR9 355 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 CDC42EP3Q9UKI2 254 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 GMPPBQ9Y5P6 360 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 TMEM14AQ9Y6G1 99 aa14.97□□□□□ -0.01
CLK4-211ENST00000522556 ZNF850A8MQ14 1090 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 F5H0A9 414 aaPredicted RBP14.96□□□□□ -0.01
CLK4-211ENST00000522556 H3BSH0 61 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 GMDSO60547 372 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 RPP14O95059 124 aaKnown RBP14.96□□□□□ -0.01
CLK4-211ENST00000522556 ANPEPP15144 967 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 PEX2P28328 305 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 DDOSTP39656 456 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 MDH2P40926 338 aaKnown RBP14.96□□□□□ -0.01
CLK4-211ENST00000522556 ELF3P78545 371 aaPredicted RBP14.96□□□□□ -0.01
CLK4-211ENST00000522556 ZSCAN26Q16670 478 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 ZNF181Q2M3W8 571 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 TMEM155Q4W5P6 130 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 DEGS2Q6QHC5 323 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 LYPD2Q6UXB3 125 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 C11orf53Q8IXP5 236 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 C10orf67Q8IYJ2 551 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 GALNT4Q8N4A0 578 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 CELF2-AS1Q8N7Q2 184 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 BOLLQ8N9W6 283 aaKnown RBP14.96□□□□□ -0.01
CLK4-211ENST00000522556 RNF166Q96A37 237 aaPredicted RBP14.96□□□□□ -0.01
CLK4-211ENST00000522556 TMEM246Q9BRR3 403 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 SLC22A4Q9H015 551 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 RGCCQ9H4X1 137 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 SP140LQ9H930 580 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 PATZ1Q9HBE1 687 aaKnown RBP14.96□□□□□ -0.01
CLK4-211ENST00000522556 TMEM165Q9HC07 324 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 GPR84Q9NQS5 396 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 C1orf123Q9NWV4 160 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 NUFIP1Q9UHK0 495 aaKnown RBP14.96□□□□□ -0.01
CLK4-211ENST00000522556 GTF2A1LQ9UNN4 478 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 SLC22A13Q9Y226 551 aa14.96□□□□□ -0.01
CLK4-211ENST00000522556 A6NLC8 198 aa14.95□□□□□ -0.02
CLK4-211ENST00000522556 LOC110117498-PIK3R3F6TDL0 507 aa14.95□□□□□ -0.02
CLK4-211ENST00000522556 PHF1O43189 567 aaPredicted RBP14.95□□□□□ -0.02
CLK4-211ENST00000522556 ZNF254O75437 659 aa14.95□□□□□ -0.02
CLK4-211ENST00000522556 FAM157CP0CG43 387 aa14.95□□□□□ -0.02
CLK4-211ENST00000522556 CFL1P23528 166 aaKnown RBP14.95□□□□□ -0.02
CLK4-211ENST00000522556 THBS2P35442 1172 aa14.95□□□□□ -0.02
CLK4-211ENST00000522556 SNRPGP62308 76 aaKnown RBP14.95□□□□□ -0.02
CLK4-211ENST00000522556 SRSF2Q01130 221 aaKnown RBP14.95□□□□□ -0.02
CLK4-211ENST00000522556 PRDX4Q13162 271 aa14.95□□□□□ -0.02
CLK4-211ENST00000522556 ZNF829Q3KNS6 432 aaPredicted RBP14.95□□□□□ -0.02
CLK4-211ENST00000522556 KRTAP21-3Q3LHN1 58 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms