RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 DCTN6O00399 190 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 TXNDC12O95881 172 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 PMP2P02689 132 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 PCBP4P57723 403 aaKnown RBP14.58□□□□□ -0.08
USP42-207ENST00000521713 ENDOGQ14249 297 aaKnown RBP14.58□□□□□ -0.08
USP42-207ENST00000521713 GCNT2Q8N0V5 402 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 NUBPLQ8TB37 319 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 ZNF764Q96H86 408 aaPredicted RBP14.58□□□□□ -0.08
USP42-207ENST00000521713 KIRREL1Q96J84 757 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 SLC23A1Q9UHI7 598 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 TRIP12Q14669 1992 aaPredicted RBP14.58□□□□□ -0.08
USP42-207ENST00000521713 PHF1O43189 567 aaPredicted RBP14.57□□□□□ -0.08
USP42-207ENST00000521713 HPP00738 406 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 SOX18P35713 384 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 EIF4EBP2Q13542 120 aaPredicted RBP14.57□□□□□ -0.08
USP42-207ENST00000521713 OR5AS1Q8N127 324 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 OR51E1Q8TCB6 317 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 C20orf24Q9BUV8 137 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 FSCN3Q9NQT6 498 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 ZNF586Q9NXT0 402 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 BRWD1Q9NSI6 2320 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 RFPL4AA6NLU0 287 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 IFITM5A6NNB3 132 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 RFPL4AL1F8VTS6 287 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 M0R1B8 84 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 EIF4EP06730 217 aaKnown RBP14.57□□□□□ -0.08
USP42-207ENST00000521713 FGF9P31371 208 aaPredicted RBP14.57□□□□□ -0.08
USP42-207ENST00000521713 MEOX1P50221 254 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 AKR1C1Q04828 323 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 DOC2BQ14184 412 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.57□□□□□ -0.08
USP42-207ENST00000521713 ZNF573Q86YE8 665 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 KLHDC1Q8N7A1 406 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 OR4C3Q8NH37 302 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 CHST2Q9Y4C5 530 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 IGHV3-15A0A0B4J1V0 119 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 E5RGE8 158 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 OR4E1P0C645 316 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 OR2B8PP59922 312 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 OR52N5Q8NH56 324 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 SECTM1Q8WVN6 248 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 SMIM19Q96E16 107 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 NSG2Q9Y328 171 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 KCNE3Q9Y6H6 103 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 MEIKINA0A087WXM9 373 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 PPP1CAP62136 330 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 BAXQ07812 192 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 M1APQ8TC57 530 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 CT55Q8WUE5 264 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 ZNF385DQ9H6B1 395 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 CYSLTR2Q9NS75 346 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 AK3Q9UIJ7 227 aa14.57□□□□□ -0.08
USP42-207ENST00000521713 TRAV20A0A0B4J274 112 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 EDN3P14138 238 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 RAB5AP20339 215 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 TGFBR1P36897 503 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 NPY4RP50391 375 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 SHEQ5VZ18 495 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 CLEC9AQ6UXN8 241 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 HSD17B13Q7Z5P4 300 aaPredicted RBP14.56□□□□□ -0.08
USP42-207ENST00000521713 LSRQ86X29 649 aaPredicted RBP14.56□□□□□ -0.08
USP42-207ENST00000521713 DMBX1Q8NFW5 382 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 ARSGQ96EG1 525 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 PHYHIPLQ96FC7 376 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 PLAC1Q9HBJ0 212 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 GPR173Q9NS66 373 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 RYDENQ9NUL5 291 aaKnown RBP14.56□□□□□ -0.08
USP42-207ENST00000521713 TCFL5Q9UL49 500 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 SLC2A10O95528 541 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 PNLIPP16233 465 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 RAB13P51153 203 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 RPUSD3Q6P087 351 aaKnown RBP14.56□□□□□ -0.08
USP42-207ENST00000521713 RELL2Q8NC24 303 aaPredicted RBP14.56□□□□□ -0.08
USP42-207ENST00000521713 NARFLQ9H6Q4 476 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 CCSO14618 274 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 SPINT1O43278 529 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 PDGFBP01127 241 aaPredicted RBP14.56□□□□□ -0.08
USP42-207ENST00000521713 IGHV4-34P06331 123 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 NKX2-1P43699 371 aaPredicted RBP14.56□□□□□ -0.08
USP42-207ENST00000521713 TOMM34Q15785 309 aaPredicted RBP14.56□□□□□ -0.08
USP42-207ENST00000521713 CEACAM16Q2WEN9 425 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 ANKRD16Q6P6B7 361 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 GLDNQ6ZMI3 551 aaPredicted RBP14.56□□□□□ -0.08
USP42-207ENST00000521713 AMER3Q8N944 861 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 B9D1Q9UPM9 204 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 CASP8AP2Q9UKL3 1982 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 CABIN1Q9Y6J0 2220 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 IGFBP1P08833 259 aaPredicted RBP14.56□□□□□ -0.08
USP42-207ENST00000521713 NDUFB7P17568 137 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 SRD5A2P31213 254 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 STARD6P59095 220 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 ZNF117Q03924 483 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 EDDM3AQ14507 147 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 RNF151Q2KHN1 245 aa14.56□□□□□ -0.08
USP42-207ENST00000521713 A0A0B4J2E0 115 aa14.55□□□□□ -0.08
USP42-207ENST00000521713 A0A1B0GX12 115 aa14.55□□□□□ -0.08
USP42-207ENST00000521713 OR6C68A6NDL8 312 aa14.55□□□□□ -0.08
USP42-207ENST00000521713 ZFP92A6NM28 416 aa14.55□□□□□ -0.08
USP42-207ENST00000521713 MEOX2P50222 304 aa14.55□□□□□ -0.08
USP42-207ENST00000521713 WNT3P56703 355 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms