RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 FAM46BQ96A09 425 aa16.14■□□□□ 0.17
TRAPPC9-210ENST00000521667 RANGRFQ9HD47 186 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC9-210ENST00000521667 MRPS28Q9Y2Q9 187 aaKnown RBP16.14■□□□□ 0.17
TRAPPC9-210ENST00000521667 LOC400499M0QZD8 3231 aa16.14■□□□□ 0.17
TRAPPC9-210ENST00000521667 FAHP16930 419 aa16.13■□□□□ 0.17
TRAPPC9-210ENST00000521667 PSMB1P20618 241 aaKnown RBP16.13■□□□□ 0.17
TRAPPC9-210ENST00000521667 FAUP35544 74 aaKnown RBP16.13■□□□□ 0.17
TRAPPC9-210ENST00000521667 DEFB109BQ30KR1 87 aa16.13■□□□□ 0.17
TRAPPC9-210ENST00000521667 ACBD4Q8NC06 268 aa16.13■□□□□ 0.17
TRAPPC9-210ENST00000521667 C20orf85Q9H1P6 137 aa16.13■□□□□ 0.17
TRAPPC9-210ENST00000521667 SCPEP1Q9HB40 452 aa16.13■□□□□ 0.17
TRAPPC9-210ENST00000521667 MCUBQ9NWR8 336 aa16.13■□□□□ 0.17
TRAPPC9-210ENST00000521667 PIGLQ9Y2B2 252 aa16.13■□□□□ 0.17
TRAPPC9-210ENST00000521667 TMEM14DPA8MWL7 114 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 ALX3O95076 343 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 LCATP04180 440 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 LPLP06858 475 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 PRF1P14222 555 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 OR3A4PP47883 348 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 NKX2-5P52952 324 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 CD83Q01151 205 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 ZFP69Q49AA0 526 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 FAAP20Q6NZ36 180 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 GLIPR1L1Q6UWM5 242 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 UTS2BQ765I0 119 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 OR2W3Q7Z3T1 314 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 ZNF101Q8IZC7 436 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 ZBTB8BQ8NAP8 495 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 SEH1LQ96EE3 360 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 BEX2Q9BXY8 128 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 CHST5Q9GZS9 411 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 GHITMQ9H3K2 345 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 UPB1Q9UBR1 384 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 RAB27BO00194 218 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 SPINK2P20155 84 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 HOXD11P31277 338 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 ACTBP60709 375 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 ACTG1P63261 375 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 REEP6Q96HR9 211 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 DMRTB1Q96MA1 342 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 FYTTD1Q96QD9 318 aaKnown RBP16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 GPER1Q99527 375 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 NEK6Q9HC98 313 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 ZNF224Q9NZL3 707 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 POU2F3Q9UKI9 436 aa16.12■□□□□ 0.17
TRAPPC9-210ENST00000521667 MEIS3P1A6NDR6 274 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 DHRS7CA6NNS2 312 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 SCGNO76038 276 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 ZNF24P17028 368 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 UBE2V2Q15819 145 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 KCNJ8Q15842 424 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 GSG1Q2KHT4 349 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 PABPC1L2AQ5JQF8 200 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 C9orf135Q5VTT2 229 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 NUFIP2Q7Z417 695 aaKnown RBP16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 CDH24Q86UP0 819 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 ZNF100Q8IYN0 542 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 SEMA6DQ8NFY4 1073 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 OR2AE1Q8NHA4 323 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 RNF170Q96K19 258 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 C1orf147Q96MC9 270 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 NKIRAS2Q9NYR9 191 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 KLK13Q9UKR3 277 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 TRAV17A0A0B4J275 112 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 GTF2F2P13984 249 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 PNLDC1Q8NA58 520 aaKnown RBP16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 ZMAT3Q9HA38 289 aaKnown RBP16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 ATPIF1Q9UII2 106 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 ZNF391Q9UJN7 358 aa16.11■□□□□ 0.17
TRAPPC9-210ENST00000521667 SLC22A20A6NK97 555 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 PEX14O75381 377 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 TGM6O95932 706 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 IGHG3P01860 377 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 UBBP0CG47 229 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 AKAIN1P0CW23 69 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 SDHBP21912 280 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 FOXG1P55316 489 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 CBX3Q13185 183 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 KISS1Q15726 138 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 LINC00303Q3SY05 128 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 ZNF260Q3ZCT1 412 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 TCTE3Q8IZS6 198 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 OR4C16Q8NGL9 310 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 KCNG3Q8TAE7 436 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 NPRL2Q8WTW4 380 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 GIMAP1Q8WWP7 306 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 AQP3Q92482 292 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 NUDT16L1Q9BRJ7 211 aaKnown RBP16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 TP63Q9H3D4 680 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 MOV10Q9HCE1 1003 aaKnown RBP16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 ZNF175Q9Y473 711 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 LAMA5O15230 3695 aa16.1■□□□□ 0.17
TRAPPC9-210ENST00000521667 A0A096LPE4 126 aa16.09■□□□□ 0.17
TRAPPC9-210ENST00000521667 A0A1W2PPZ6 126 aa16.09■□□□□ 0.17
TRAPPC9-210ENST00000521667 WIPF3A6NGB9 483 aa16.09■□□□□ 0.17
TRAPPC9-210ENST00000521667 GSK3AP49840 483 aa16.09■□□□□ 0.17
TRAPPC9-210ENST00000521667 FAPQ12884 760 aa16.09■□□□□ 0.17
TRAPPC9-210ENST00000521667 FOXC1Q12948 553 aa16.09■□□□□ 0.17
TRAPPC9-210ENST00000521667 Q6ZTK2 550 aa16.09■□□□□ 0.17
TRAPPC9-210ENST00000521667 CPEB3Q8NE35 698 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms