RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 GPR171O14626 319 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 CLOCKO15516 846 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 CYTIPO60759 359 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 RAMP1O60894 148 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 SS18L1O75177 396 aaPredicted RBP2.69□□□□□ -1.98
VPS13B-209ENST00000521559 CCNB2O95067 398 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 AKR7A3O95154 331 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 VAMP5O95183 116 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 OR6A2O95222 327 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 HPRP00739 348 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 CST1P01037 141 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 YES1P07947 543 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 ASAH2BP0C7U1 165 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 SMIM18P0DKX4 95 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 IFI30P13284 250 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 KLK2P20151 261 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 AZGP1P25311 298 aaKnown RBP2.69□□□□□ -1.98
VPS13B-209ENST00000521559 FASP25445 335 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 GTF2E2P29084 291 aaKnown RBP2.69□□□□□ -1.98
VPS13B-209ENST00000521559 GRPRP30550 384 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 RRM2P31350 389 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 OPRM1P35372 400 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 RPS5P46782 204 aaKnown RBP2.69□□□□□ -1.98
VPS13B-209ENST00000521559 OMPP47874 163 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 GSSP48637 474 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 NPY4RP50391 375 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 ERFP50548 548 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 P2RY4P51582 365 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 ALDH3A2P51648 485 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 ARHGDIAP52565 204 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 SMSP52788 366 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 CAPZA1P52907 286 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 RASGEF1BQ0VAM2 473 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 ZP4Q12836 540 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 PMS2P3Q13401 168 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 C1DQ13901 141 aaKnown RBP2.69□□□□□ -1.98
VPS13B-209ENST00000521559 SLC17A1Q14916 467 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 GUSBP1Q15486 140 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 ATP6AP1Q15904 470 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 MICAQ29983 383 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 EXOC3L2Q2M3D2 409 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 MS4A18Q3C1V0 323 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 ANKDD1AQ495B1 522 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 FGD3Q5JSP0 725 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 TMEM225Q6GV28 225 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 ZNF770Q6IQ21 691 aaPredicted RBP2.69□□□□□ -1.98
VPS13B-209ENST00000521559 C1orf94Q6P1W5 598 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 TRAT1Q6PIZ9 186 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 XKRXQ6PP77 449 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 NHLRC1Q6VVB1 395 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 FCRLAQ7L513 359 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 ZER1Q7Z7L7 766 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 RPRMLQ8N4K4 120 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 LINC00471Q8N535 108 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 LRRC17Q8N6Y2 441 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 ZIC4Q8N9L1 334 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 OR4K5Q8NGD3 323 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 OR9K2Q8NGE7 335 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 OR5J2Q8NH18 312 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 OR52J3Q8NH60 311 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 LILRB4Q8NHJ6 448 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 PFN4Q8NHR9 129 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 FNDC9Q8TBE3 224 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 PIGXQ8TBF5 258 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 SLC7A13Q8TCU3 470 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 GNPDA2Q8TDQ7 276 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 GIPC3Q8TF64 312 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 ABHD3Q8WU67 409 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 PHLDA1Q8WV24 401 aaPredicted RBP2.69□□□□□ -1.98
VPS13B-209ENST00000521559 HPSE2Q8WWQ2 592 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 TMEM45BQ96B21 275 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 BPIFA2Q96DR5 249 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 DNAJA3Q96EY1 480 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 NRBF2Q96F24 287 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 CENPNQ96H22 339 aaPredicted RBP2.69□□□□□ -1.98
VPS13B-209ENST00000521559 OXGR1Q96P68 337 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 TNFRSF13CQ96RJ3 184 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 SFXN3Q9BWM7 321 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 CLEC7AQ9BXN2 247 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 NTN4Q9HB63 628 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 S100A14Q9HCY8 104 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 CHST11Q9NPF2 352 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 FANCFQ9NPI8 374 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 MEPEQ9NQ76 525 aaPredicted RBP2.69□□□□□ -1.98
VPS13B-209ENST00000521559 NANSQ9NR45 359 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 VNN3Q9NY84 501 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 EMC3Q9P0I2 261 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 C6orf203Q9P0P8 240 aaPredicted RBP2.69□□□□□ -1.98
VPS13B-209ENST00000521559 ZNF629Q9UEG4 869 aaPredicted RBP2.69□□□□□ -1.98
VPS13B-209ENST00000521559 SH3BGRL2Q9UJC5 107 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 ZNF229Q9UJW7 825 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 RNF150Q9ULK6 438 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 MGAT4BQ9UQ53 548 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 RASD1Q9Y272 281 aa2.69□□□□□ -1.98
VPS13B-209ENST00000521559 MED13Q9UHV7 2174 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 SPEGQ15772 3267 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 AKAP13Q12802 2813 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 TRAV34A0A0B4J273 112 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 A0A1W2PNV4 684 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 ARRDC5A6NEK1 342 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms