RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 HHATQ5VTY9 493 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 TTC27Q6P3X3 843 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 SIGLEC15Q6ZMC9 328 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF841Q6ZN19 808 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 TMPPEQ6ZT21 453 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 LRRC28Q86X40 367 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-208ENST00000521037 NDUFA11Q86Y39 141 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 STHQ8IWL8 128 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 C1orf174Q8IYL3 243 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 UBE2J2Q8N2K1 259 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 MPLKIPQ8TAP9 179 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 TMEM255BQ8WV15 326 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 SELENOMQ8WWX9 145 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 DNAJC9Q8WXX5 260 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 RAB8BQ92930 207 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 TMEM45BQ96B21 275 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 TUBGCP3Q96CW5 907 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 GIMAP5Q96F15 307 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 THOC1Q96FV9 657 aaKnown RBP3.05□□□□□ -1.92
VPS13B-208ENST00000521037 SH3YL1Q96HL8 342 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-208ENST00000521037 ARL5BQ96KC2 179 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 SLC30A2Q9BRI3 323 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 SIRPDQ9H106 197 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 VCX3BQ9H321 246 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 TMEM231Q9H6L2 316 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 RMND5AQ9H871 391 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 VCX3AQ9NNX9 186 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 FARSBQ9NSD9 589 aaKnown RBP3.05□□□□□ -1.92
VPS13B-208ENST00000521037 CNOT2Q9NZN8 540 aaKnown RBP3.05□□□□□ -1.92
VPS13B-208ENST00000521037 PSMC3IPQ9P2W1 217 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-208ENST00000521037 NOSIPQ9Y314 301 aaKnown RBP3.05□□□□□ -1.92
VPS13B-208ENST00000521037 SH3GLB1Q9Y371 365 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 MAB21L2Q9Y586 359 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 TRAV18A0A075B6X5 111 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 A0A1W2PQD3 144 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 SMIM23A6NLE4 172 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 H0YIV9 168 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 ARPC2O15144 300 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 EDF1O60869 148 aaKnown RBP3.04□□□□□ -1.92
VPS13B-208ENST00000521037 SMIM24O75264 130 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 UPK3AO75631 287 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 IGHV1-46P01743 117 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 KLK1P06870 262 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 CCDC159P0C7I6 412 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 CALCBP10092 127 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 BCKDHAP12694 445 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF250P15622 560 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 CBLP22681 906 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 MT3P25713 68 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 IVDP26440 423 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 MNDAP41218 407 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 RGS4P49798 205 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 RAP1GDS1P52306 607 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 FGF12P61328 243 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 CX3CL1P78423 397 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 MRPS22P82650 360 aaKnown RBP3.04□□□□□ -1.92
VPS13B-208ENST00000521037 SPIBQ01892 262 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF91Q05481 1191 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 SNX1Q13596 522 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 HNF4GQ14541 408 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 TRMT5Q32P41 509 aaKnown RBP3.04□□□□□ -1.92
VPS13B-208ENST00000521037 KRTAP27-1Q3LI81 207 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 DNAL1Q4LDG9 190 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 PAPPA-AS1Q5QFB9 102 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 PDSS1Q5T2R2 415 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 MED27Q6P2C8 311 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 PAQR6Q6TCH4 344 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 C4orf22Q6V702 233 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 Q6ZTK2 550 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 NET1Q7Z628 596 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-208ENST00000521037 MDP1Q86V88 176 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 MMD2Q8IY49 270 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 Q8N2B8 174 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 OR2L13Q8N349 312 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 METTL4Q8N3J2 472 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 OR52B4Q8NGK2 314 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 OR4A16Q8NH70 328 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 PRSS3P2Q8NHM4 247 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 FGFBP3Q8TAT2 258 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 PIFOQ8TCI5 191 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 PIK3R3Q92569 461 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 STMN2Q93045 179 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 PPP1R14BQ96C90 147 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 C16orf58Q96GQ5 468 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 TMEM19Q96HH6 336 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 SGK494Q96LW2 274 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 GAL3ST1Q99999 423 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 SHCBP1LQ9BZQ2 653 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 LAT2Q9GZY6 243 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF702PQ9H963 129 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 TIGARQ9NQ88 270 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 SDHAF3Q9NRP4 125 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 ACOXLQ9NUZ1 547 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 NMRK1Q9NWW6 199 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 TAS2R13Q9NYV9 303 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 ZNRD1Q9P1U0 126 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 PAK5Q9P286 719 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 STX18Q9P2W9 335 aaKnown RBP3.04□□□□□ -1.92
VPS13B-208ENST00000521037 VPREB3Q9UKI3 123 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 217.4 ms