RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 LOC100289279A0A1B0GTE1 492 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 ATXN7O15265 892 aaPredicted RBP12.61□□□□□ -0.39
CLN8-204ENST00000519254 APOC1P02654 83 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 MMP7P09237 267 aaPredicted RBP12.61□□□□□ -0.39
CLN8-204ENST00000519254 CD3GP09693 182 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 FAM157BP0CG42 384 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 BDKRB2P30411 391 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 INPP1P49441 399 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 ECH1Q13011 328 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 MRPL49Q13405 166 aaKnown RBP12.61□□□□□ -0.39
CLN8-204ENST00000519254 EIF2S3LQ2VIR3 472 aaKnown RBP12.61□□□□□ -0.39
CLN8-204ENST00000519254 GFOD2Q3B7J2 385 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 NRN1LQ496H8 165 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 SLC16A14Q7RTX9 510 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 ZNF554Q86TJ5 538 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 NKAIN3Q8N8D7 197 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 OR6M1Q8NGM8 313 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 OR14K1Q8NGZ2 314 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 AKR7LQ8NHP1 331 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 OR2H1Q9GZK4 316 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 RBFOX1Q9NWB1 397 aaKnown RBP12.61□□□□□ -0.39
CLN8-204ENST00000519254 SHANK1Q9Y566 2161 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 A0A0G2JNJ9 132 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 TMEM272A0A1B0GTI8 110 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 FARS2O95363 451 aaKnown RBP12.6□□□□□ -0.39
CLN8-204ENST00000519254 CRHP06850 196 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 ZNF20P17024 532 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 BMP5P22003 454 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 MPGP29372 298 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 CEACAM8P31997 349 aaPredicted RBP12.6□□□□□ -0.39
CLN8-204ENST00000519254 MNDAP41218 407 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 PCBD1P61457 104 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 HGFACQ04756 655 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 GPR176Q14439 515 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 RNASE12Q5GAN4 147 aaKnown RBP12.6□□□□□ -0.39
CLN8-204ENST00000519254 SFRP5Q5T4F7 317 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 HACD4Q5VWC8 232 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 MZT2BQ6NZ67 158 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 MTFR2Q6P444 385 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 ANKRD16Q6P6B7 361 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 Q6ZSR3 168 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 JAGN1Q8N5M9 183 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 ZNF610Q8N9Z0 462 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 OR52N4Q8NGI2 321 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 OR13C9Q8NGT0 318 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 SMIM4Q8WVI0 70 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 ZC3HAV1LQ96H79 300 aaKnown RBP12.6□□□□□ -0.39
CLN8-204ENST00000519254 MMP28Q9H239 520 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 TMEM138Q9NPI0 162 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 ZNF224Q9NZL3 707 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 Q9UFV3 132 aa12.6□□□□□ -0.39
CLN8-204ENST00000519254 CACNA1BQ00975 2339 aa12.59□□□□□ -0.39
CLN8-204ENST00000519254 LDLRAD4O15165 306 aa12.59□□□□□ -0.39
CLN8-204ENST00000519254 SULT1B1O43704 296 aa12.59□□□□□ -0.39
CLN8-204ENST00000519254 LYZL6O75951 148 aa12.59□□□□□ -0.39
CLN8-204ENST00000519254 IL18BPO95998 194 aa12.59□□□□□ -0.39
CLN8-204ENST00000519254 RAB3AP20336 220 aa12.59□□□□□ -0.39
CLN8-204ENST00000519254 SRP9P49458 86 aaKnown RBP12.59□□□□□ -0.39
CLN8-204ENST00000519254 SNAI3Q3KNW1 292 aa12.59□□□□□ -0.39
CLN8-204ENST00000519254 TMEM69Q5SWH9 247 aa12.59□□□□□ -0.39
CLN8-204ENST00000519254 DRAM2Q6UX65 266 aa12.59□□□□□ -0.39
CLN8-204ENST00000519254 Q6ZT83 130 aa12.59□□□□□ -0.39
CLN8-204ENST00000519254 ZNF627Q7L945 461 aa12.59□□□□□ -0.39
CLN8-204ENST00000519254 OR5AS1Q8N127 324 aa12.59□□□□□ -0.39
CLN8-204ENST00000519254 OR4D6Q8NGJ1 314 aa12.59□□□□□ -0.39
CLN8-204ENST00000519254 FOXRED1Q96CU9 486 aaPredicted RBP12.59□□□□□ -0.39
CLN8-204ENST00000519254 SFXN3Q9BWM7 321 aa12.59□□□□□ -0.39
CLN8-204ENST00000519254 AUNIPQ9H7T9 357 aa12.59□□□□□ -0.39
CLN8-204ENST00000519254 PLSCR4Q9NRQ2 329 aa12.59□□□□□ -0.39
CLN8-204ENST00000519254 EEF1E1-BLOC1S5C9J1V9 151 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 XRCC3O43542 346 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 CTAG2O75638 210 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 RAD51DO75771 328 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 CGAP01215 116 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 ARSBP15848 533 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 IGHV1-2P23083 117 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 TPTEP56180 551 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 TAS2R20P59543 309 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 TSC22D1Q15714 1073 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 HIKESHIQ53FT3 197 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 GLCCI1Q86VQ1 547 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 DUSP18Q8NEJ0 188 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 ENKURQ8TC29 256 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 GCDHQ92947 438 aaPredicted RBP12.58□□□□□ -0.39
CLN8-204ENST00000519254 SGK3Q96BR1 496 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 SORCS2Q96PQ0 1159 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 CNTD2Q9H8S5 307 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 V9GYS6 101 aa12.58□□□□□ -0.39
CLN8-204ENST00000519254 CIB4A0PJX0 185 aa12.58□□□□□ -0.4
CLN8-204ENST00000519254 ORC5O43913 435 aa12.58□□□□□ -0.4
CLN8-204ENST00000519254 TPPPO94811 219 aa12.58□□□□□ -0.4
CLN8-204ENST00000519254 PTHLHP12272 177 aa12.58□□□□□ -0.4
CLN8-204ENST00000519254 CA7P43166 264 aa12.58□□□□□ -0.4
CLN8-204ENST00000519254 HTR5AP47898 357 aa12.58□□□□□ -0.4
CLN8-204ENST00000519254 CD300CQ08708 224 aa12.58□□□□□ -0.4
CLN8-204ENST00000519254 CARTPTQ16568 116 aa12.58□□□□□ -0.4
CLN8-204ENST00000519254 PGAP1Q75T13 922 aa12.58□□□□□ -0.4
CLN8-204ENST00000519254 RNF144BQ7Z419 303 aa12.58□□□□□ -0.4
CLN8-204ENST00000519254 OR52H1Q8NGJ2 320 aa12.58□□□□□ -0.4
CLN8-204ENST00000519254 OR1K1Q8NGR3 316 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms