RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 SETD9Q8NE22 299 aa18.58■□□□□ 0.56
VEGFA-217ENST00000518538 HPS1Q92902 700 aa18.58■□□□□ 0.56
VEGFA-217ENST00000518538 RAB1CQ92928 201 aa18.58■□□□□ 0.56
VEGFA-217ENST00000518538 ITFG2Q969R8 447 aa18.58■□□□□ 0.56
VEGFA-217ENST00000518538 LGALS12Q96DT0 336 aa18.58■□□□□ 0.56
VEGFA-217ENST00000518538 SIGLEC11Q96RL6 698 aa18.58■□□□□ 0.56
VEGFA-217ENST00000518538 ADI1Q9BV57 179 aa18.58■□□□□ 0.56
VEGFA-217ENST00000518538 GCM1Q9NP62 436 aa18.58■□□□□ 0.56
VEGFA-217ENST00000518538 WIPI2Q9Y4P8 454 aa18.58■□□□□ 0.56
VEGFA-217ENST00000518538 TEP1Q99973 2627 aaKnown RBP18.58■□□□□ 0.56
VEGFA-217ENST00000518538 DAPL1A0PJW8 107 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 H0YAE9 185 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 IFNL4K9M1U5 179 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 CD5LO43866 347 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 WBP4O75554 376 aaKnown RBP18.57■□□□□ 0.56
VEGFA-217ENST00000518538 IGLV3-1P01715 115 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 IGHV4-31P0DP07 118 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 CAPGP40121 348 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 GATA4P43694 442 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 MVKQ03426 396 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 MAB21L1Q13394 359 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 AVPI1Q5T686 147 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 LIPNQ5VXI9 398 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 PEG10Q86TG7 708 aaKnown RBP18.57■□□□□ 0.56
VEGFA-217ENST00000518538 FTMTQ8N4E7 242 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 ACBD7Q8N6N7 88 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 SPERTQ8NA61 448 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 AMBNQ9NP70 447 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 G6PC2Q9NQR9 355 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 OR52A1Q9UKL2 312 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 GTF2A1LQ9UNN4 478 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 RPL36Q9Y3U8 105 aaKnown RBP18.57■□□□□ 0.56
VEGFA-217ENST00000518538 SNX5Q9Y5X3 404 aa18.57■□□□□ 0.56
VEGFA-217ENST00000518538 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.56■□□□□ 0.56
VEGFA-217ENST00000518538 WNT9BO14905 357 aa18.56■□□□□ 0.56
VEGFA-217ENST00000518538 RPP14O95059 124 aaKnown RBP18.56■□□□□ 0.56
VEGFA-217ENST00000518538 TTRP02766 147 aa18.56■□□□□ 0.56
VEGFA-217ENST00000518538 ACKR3P25106 362 aa18.56■□□□□ 0.56
VEGFA-217ENST00000518538 GZMKP49863 264 aa18.56■□□□□ 0.56
VEGFA-217ENST00000518538 RAB40BQ12829 278 aa18.56■□□□□ 0.56
VEGFA-217ENST00000518538 BCL2L15Q5TBC7 163 aa18.56■□□□□ 0.56
VEGFA-217ENST00000518538 FAM220AQ7Z4H9 259 aa18.56■□□□□ 0.56
VEGFA-217ENST00000518538 CLDND2Q8NHS1 167 aa18.56■□□□□ 0.56
VEGFA-217ENST00000518538 OR51E1Q8TCB6 317 aa18.56■□□□□ 0.56
VEGFA-217ENST00000518538 DVL3Q92997 716 aaPredicted RBP18.56■□□□□ 0.56
VEGFA-217ENST00000518538 ERGIC1Q969X5 290 aa18.56■□□□□ 0.56
VEGFA-217ENST00000518538 PPP1R14AQ96A00 147 aa18.56■□□□□ 0.56
VEGFA-217ENST00000518538 SOX7Q9BT81 388 aa18.56■□□□□ 0.56
VEGFA-217ENST00000518538 PAPOLGQ9BWT3 736 aaKnown RBP18.56■□□□□ 0.56
VEGFA-217ENST00000518538 NARFLQ9H6Q4 476 aa18.56■□□□□ 0.56
VEGFA-217ENST00000518538 MRPS18AQ9NVS2 196 aaKnown RBP18.56■□□□□ 0.56
VEGFA-217ENST00000518538 DCAF16Q9NXF7 216 aa18.56■□□□□ 0.56
VEGFA-217ENST00000518538 HSPE1-MOB4S4R3N1 261 aa18.56■□□□□ 0.56
VEGFA-217ENST00000518538 IGHV3-64DA0A0J9YX35 117 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 PTBP3O95758 552 aaKnown RBP18.55■□□□□ 0.56
VEGFA-217ENST00000518538 FADS2O95864 444 aaKnown RBP18.55■□□□□ 0.56
VEGFA-217ENST00000518538 ATP6V1B1P15313 513 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 IL2RGP31785 369 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 ISL1P61371 349 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 MZT1Q08AG7 82 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 HNRNPA0Q13151 305 aaKnown RBP18.55■□□□□ 0.56
VEGFA-217ENST00000518538 ZNF181Q2M3W8 571 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 CDONQ4KMG0 1287 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 CYB5R2Q6BCY4 276 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 KCTD20Q7Z5Y7 419 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 MOGAT3Q86VF5 341 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 COMMD2Q86X83 199 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 ELMOD2Q8IZ81 293 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 CNIH3Q8TBE1 160 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 NRG4Q8WWG1 115 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 GPR84Q9NQS5 396 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 GNG8Q9UK08 70 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 RHBDD3Q9Y3P4 386 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 NPTNQ9Y639 398 aa18.55■□□□□ 0.56
VEGFA-217ENST00000518538 CST4P01036 141 aa18.54■□□□□ 0.56
VEGFA-217ENST00000518538 IGHA1P01876 353 aa18.54■□□□□ 0.56
VEGFA-217ENST00000518538 GNALP38405 381 aa18.54■□□□□ 0.56
VEGFA-217ENST00000518538 MAP2K3P46734 347 aa18.54■□□□□ 0.56
VEGFA-217ENST00000518538 SMN1Q16637 294 aaKnown RBP18.54■□□□□ 0.56
VEGFA-217ENST00000518538 TP53I3Q53FA7 332 aa18.54■□□□□ 0.56
VEGFA-217ENST00000518538 PLPP7Q8NBV4 271 aa18.54■□□□□ 0.56
VEGFA-217ENST00000518538 OR8S1Q8NH09 359 aa18.54■□□□□ 0.56
VEGFA-217ENST00000518538 ZNF420Q8TAQ5 688 aaPredicted RBP18.54■□□□□ 0.56
VEGFA-217ENST00000518538 RORBQ92753 470 aa18.54■□□□□ 0.56
VEGFA-217ENST00000518538 MRPL48Q96GC5 212 aaKnown RBP18.54■□□□□ 0.56
VEGFA-217ENST00000518538 MYCBPQ99417 103 aaPredicted RBP18.54■□□□□ 0.56
VEGFA-217ENST00000518538 INPP5EQ9NRR6 644 aa18.54■□□□□ 0.56
VEGFA-217ENST00000518538 ACOXLQ9NUZ1 547 aa18.54■□□□□ 0.56
VEGFA-217ENST00000518538 C14orf119Q9NWQ9 140 aa18.54■□□□□ 0.56
VEGFA-217ENST00000518538 MYRFQ9Y2G1 1151 aa18.54■□□□□ 0.56
VEGFA-217ENST00000518538 MPC1Q9Y5U8 109 aa18.54■□□□□ 0.56
VEGFA-217ENST00000518538 DYSFO75923 2080 aa18.53■□□□□ 0.56
VEGFA-217ENST00000518538 LRRC30A6NM36 301 aa18.53■□□□□ 0.56
VEGFA-217ENST00000518538 TMEM178BH3BS89 294 aa18.53■□□□□ 0.56
VEGFA-217ENST00000518538 FAM20BO75063 409 aa18.53■□□□□ 0.56
VEGFA-217ENST00000518538 MTRF1O75570 445 aaKnown RBP18.53■□□□□ 0.56
VEGFA-217ENST00000518538 RBMXP38159 391 aaKnown RBP18.53■□□□□ 0.56
VEGFA-217ENST00000518538 ACTA2P62736 377 aa18.53■□□□□ 0.56
VEGFA-217ENST00000518538 ACTG2P63267 376 aa18.53■□□□□ 0.56
VEGFA-217ENST00000518538 KLHL22Q53GT1 634 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms