RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 IL34Q6ZMJ4 242 aa16.23■□□□□ 0.19
SDC2-202ENST00000518385 DPY19L4Q7Z388 723 aa16.23■□□□□ 0.19
SDC2-202ENST00000518385 CATSPERDQ86XM0 798 aa16.23■□□□□ 0.19
SDC2-202ENST00000518385 WDSUB1Q8N9V3 476 aa16.23■□□□□ 0.19
SDC2-202ENST00000518385 NKD1Q969G9 470 aa16.23■□□□□ 0.19
SDC2-202ENST00000518385 ARL11Q969Q4 196 aa16.23■□□□□ 0.19
SDC2-202ENST00000518385 DMRTA2Q96SC8 542 aa16.23■□□□□ 0.19
SDC2-202ENST00000518385 ASCL3Q9NQ33 180 aa16.23■□□□□ 0.19
SDC2-202ENST00000518385 SHPKQ9UHJ6 478 aa16.23■□□□□ 0.19
SDC2-202ENST00000518385 RPH3AQ9Y2J0 694 aaPredicted RBP16.23■□□□□ 0.19
SDC2-202ENST00000518385 TRBV6-7A0A0A0MS04 114 aa16.22■□□□□ 0.19
SDC2-202ENST00000518385 IGLV1-36A0A0B4J1U3 117 aa16.22■□□□□ 0.19
SDC2-202ENST00000518385 PQLC2LA1A4F0 135 aa16.22■□□□□ 0.19
SDC2-202ENST00000518385 FAM171A2A8MVW0 826 aa16.22■□□□□ 0.19
SDC2-202ENST00000518385 NPIPA5E9PKD4 350 aa16.22■□□□□ 0.19
SDC2-202ENST00000518385 SLC34A2O95436 690 aa16.22■□□□□ 0.19
SDC2-202ENST00000518385 CX3CR1P49238 355 aa16.22■□□□□ 0.19
SDC2-202ENST00000518385 OC90Q02509 493 aaPredicted RBP16.22■□□□□ 0.19
SDC2-202ENST00000518385 SHEQ5VZ18 495 aa16.22■□□□□ 0.19
SDC2-202ENST00000518385 DTX1Q86Y01 620 aa16.22■□□□□ 0.19
SDC2-202ENST00000518385 TMEM185AQ8NFB2 350 aa16.22■□□□□ 0.19
SDC2-202ENST00000518385 ASB10Q8WXI3 467 aa16.22■□□□□ 0.19
SDC2-202ENST00000518385 ARL5BQ96KC2 179 aa16.22■□□□□ 0.19
SDC2-202ENST00000518385 ZNF471Q9BX82 626 aaPredicted RBP16.22■□□□□ 0.19
SDC2-202ENST00000518385 ZNF160Q9HCG1 818 aa16.22■□□□□ 0.19
SDC2-202ENST00000518385 FBLN5Q9UBX5 448 aa16.22■□□□□ 0.19
SDC2-202ENST00000518385 HHLA2Q9UM44 414 aa16.22■□□□□ 0.19
SDC2-202ENST00000518385 NPIPA1Q9UND3 350 aa16.22■□□□□ 0.19
SDC2-202ENST00000518385 PTPRZ1P23471 2315 aaPredicted RBP16.22■□□□□ 0.19
SDC2-202ENST00000518385 H7C1C5 153 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 SDHBP21912 280 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 LUMP51884 338 aaPredicted RBP16.21■□□□□ 0.19
SDC2-202ENST00000518385 LCN6P62502 163 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 ADAM8P78325 824 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 GLO1Q04760 184 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 PMPCAQ10713 525 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 INPP5JQ15735 1006 aaPredicted RBP16.21■□□□□ 0.19
SDC2-202ENST00000518385 ACTBL2Q562R1 376 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 RNASE10Q5GAN6 216 aaKnown RBP16.21■□□□□ 0.19
SDC2-202ENST00000518385 NKAPLQ5M9Q1 402 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 TMEM244Q5VVB8 128 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 DHRS7BQ6IAN0 325 aaPredicted RBP16.21■□□□□ 0.19
SDC2-202ENST00000518385 H3F3CQ6NXT2 135 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 DRAM2Q6UX65 266 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 GTPBP8Q8N3Z3 284 aaPredicted RBP16.21■□□□□ 0.19
SDC2-202ENST00000518385 GALNT16Q8N428 558 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 TMEM156Q8N614 296 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 AQP3Q92482 292 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 TSNAXQ99598 290 aaKnown RBP16.21■□□□□ 0.19
SDC2-202ENST00000518385 NMES1Q9C002 83 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 CHST6Q9GZX3 395 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 TMEM100Q9NV29 134 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 ATPIF1Q9UII2 106 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 WDFY3Q8IZQ1 3526 aa16.21■□□□□ 0.19
SDC2-202ENST00000518385 LOC102725191A0A1B0GVB3 256 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 TVP23AA6NH52 213 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 EFNA2O43921 213 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 SLC16A7O60669 478 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 SNAPINO95295 136 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 PLGP00747 810 aaPredicted RBP16.21■□□□□ 0.18
SDC2-202ENST00000518385 HLA-AP01891 365 aaKnown RBP16.21■□□□□ 0.18
SDC2-202ENST00000518385 HEXAP06865 529 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 CASRP41180 1078 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 DSCR4P56555 118 aaPredicted RBP16.21■□□□□ 0.18
SDC2-202ENST00000518385 HSF1Q00613 529 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 MEP1BQ16820 701 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 SLC35D2Q76EJ3 337 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 SKA3Q8IX90 412 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 SLC30A7Q8NEW0 376 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 RNF141Q8WVD5 230 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 ASB5Q8WWX0 329 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 TMEM41AQ96HV5 264 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 C5orf34Q96MH7 638 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 SCGB3A2Q96PL1 93 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 BIN3Q9NQY0 253 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 CPAMD8Q8IZJ3 1885 aa16.21■□□□□ 0.18
SDC2-202ENST00000518385 AHCTF1Q8WYP5 2266 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 TEX13DA0A0J9YY54 714 aaPredicted RBP16.2■□□□□ 0.18
SDC2-202ENST00000518385 SULT2B1O00204 365 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 DUS4LO95620 317 aaKnown RBP16.2■□□□□ 0.18
SDC2-202ENST00000518385 SERPINA7P05543 415 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 CELA2AP08217 269 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 DNASE1L1P49184 302 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 PLA2G7Q13093 441 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 MYBPHQ13203 477 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 ELP2Q6IA86 826 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 ATRAIDQ6UW56 229 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 C17orf107Q6ZR85 190 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 ZNF627Q7L945 461 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 RELL2Q8NC24 303 aaPredicted RBP16.2■□□□□ 0.18
SDC2-202ENST00000518385 OR1J2Q8NGS2 313 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 OR13C8Q8NGS7 320 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 OR10AC1Q8NH08 325 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 OR8S1Q8NH09 359 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 FAM46BQ96A09 425 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 NARS2Q96I59 477 aaKnown RBP16.2■□□□□ 0.18
SDC2-202ENST00000518385 P4HTMQ9NXG6 502 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 R4GMQ9 66 aa16.2■□□□□ 0.18
SDC2-202ENST00000518385 OR2AT4A6NND4 320 aa16.19■□□□□ 0.18
SDC2-202ENST00000518385 H0YC42 278 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms