RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 EXO5Q9H790 373 aa23.2■■□□□ 1.3
COL13A1-210ENST00000517713 BEX1Q9HBH7 125 aa23.2■■□□□ 1.3
COL13A1-210ENST00000517713 ARPC1BO15143 372 aaKnown RBP23.2■■□□□ 1.3
COL13A1-210ENST00000517713 PRF1P14222 555 aa23.2■■□□□ 1.3
COL13A1-210ENST00000517713 TNFSF10P50591 281 aa23.2■■□□□ 1.3
COL13A1-210ENST00000517713 HGFACQ04756 655 aa23.2■■□□□ 1.3
COL13A1-210ENST00000517713 ST3GAL2Q16842 350 aa23.2■■□□□ 1.3
COL13A1-210ENST00000517713 CD276Q5ZPR3 534 aa23.2■■□□□ 1.3
COL13A1-210ENST00000517713 OR2W3Q7Z3T1 314 aa23.2■■□□□ 1.3
COL13A1-210ENST00000517713 DACT3Q96B18 629 aaPredicted RBP23.2■■□□□ 1.3
COL13A1-210ENST00000517713 OR6C65A6NJZ3 312 aa23.19■■□□□ 1.3
COL13A1-210ENST00000517713 SCGNO76038 276 aa23.19■■□□□ 1.3
COL13A1-210ENST00000517713 NDUFB6O95139 128 aa23.19■■□□□ 1.3
COL13A1-210ENST00000517713 VEGFCP49767 419 aa23.19■■□□□ 1.3
COL13A1-210ENST00000517713 MRPS15P82914 257 aaKnown RBP23.19■■□□□ 1.3
COL13A1-210ENST00000517713 RNPS1Q15287 305 aaKnown RBP23.19■■□□□ 1.3
COL13A1-210ENST00000517713 RNFT1Q5M7Z0 435 aa23.19■■□□□ 1.3
COL13A1-210ENST00000517713 ZNF782Q6ZMW2 699 aaPredicted RBP23.19■■□□□ 1.3
COL13A1-210ENST00000517713 BEST4Q8NFU0 473 aa23.19■■□□□ 1.3
COL13A1-210ENST00000517713 OR4D10Q8NGI6 311 aa23.19■■□□□ 1.3
COL13A1-210ENST00000517713 AQP3Q92482 292 aa23.19■■□□□ 1.3
COL13A1-210ENST00000517713 ELF5Q9UKW6 265 aaPredicted RBP23.19■■□□□ 1.3
COL13A1-210ENST00000517713 PTPRBP23467 1997 aa23.19■■□□□ 1.3
COL13A1-210ENST00000517713 TMEM235A6NFC5 223 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 PRAF2O60831 178 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 FCER2P06734 321 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 YES1P07947 543 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 WT1P19544 449 aaPredicted RBP23.18■■□□□ 1.3
COL13A1-210ENST00000517713 UBE2V2Q15819 145 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 ZNF260Q3ZCT1 412 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 CAPSLQ8WWF8 208 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 CHST5Q9GZS9 411 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 ZNF224Q9NZL3 707 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 TRGV5A0A0B4J1U4 118 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 WIPF3A6NGB9 483 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 RPL36A-HNRNPH2H7BZ11 118 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 ICMTO60725 284 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 ALX3O95076 343 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 LCATP04180 440 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 CD3DP04234 171 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 MMP7P09237 267 aaPredicted RBP23.18■■□□□ 1.3
COL13A1-210ENST00000517713 HOXD11P31277 338 aaPredicted RBP23.18■■□□□ 1.3
COL13A1-210ENST00000517713 NBL1P41271 181 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 ARF1P84077 181 aaKnown RBP23.18■■□□□ 1.3
COL13A1-210ENST00000517713 STK11Q15831 433 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 CHST4Q8NCG5 386 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 FDCSPQ8NFU4 85 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 OR8S1Q8NH09 359 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 C1orf147Q96MC9 270 aaPredicted RBP23.18■■□□□ 1.3
COL13A1-210ENST00000517713 CSAG2Q9Y5P2 127 aa23.18■■□□□ 1.3
COL13A1-210ENST00000517713 ZNF587BE7ETH6 402 aa23.17■■□□□ 1.3
COL13A1-210ENST00000517713 TAS2R19P59542 299 aa23.17■■□□□ 1.3
COL13A1-210ENST00000517713 DMRTC1Q5HYR2 192 aa23.17■■□□□ 1.3
COL13A1-210ENST00000517713 STEAP1BQ6NZ63 245 aa23.17■■□□□ 1.3
COL13A1-210ENST00000517713 Q6ZTK2 550 aa23.17■■□□□ 1.3
COL13A1-210ENST00000517713 FGD2Q7Z6J4 655 aa23.17■■□□□ 1.3
COL13A1-210ENST00000517713 MCEMP1Q8IX19 187 aa23.17■■□□□ 1.3
COL13A1-210ENST00000517713 GABRG1Q8N1C3 465 aa23.17■■□□□ 1.3
COL13A1-210ENST00000517713 TMEM229BQ8NBD8 167 aa23.17■■□□□ 1.3
COL13A1-210ENST00000517713 KCNG3Q8TAE7 436 aa23.17■■□□□ 1.3
COL13A1-210ENST00000517713 DVL3Q92997 716 aaPredicted RBP23.17■■□□□ 1.3
COL13A1-210ENST00000517713 CMBLQ96DG6 245 aa23.17■■□□□ 1.3
COL13A1-210ENST00000517713 REEP6Q96HR9 211 aa23.17■■□□□ 1.3
COL13A1-210ENST00000517713 GSK3AP49840 483 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 KISS1Q15726 138 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 CDNFQ49AH0 187 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 PNLDC1Q8NA58 520 aaKnown RBP23.16■■□□□ 1.3
COL13A1-210ENST00000517713 SEMA6DQ8NFY4 1073 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 OR11H7Q8NGC8 314 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 OR2AE1Q8NHA4 323 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 NPRL2Q8WTW4 380 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 NUDT16L1Q9BRJ7 211 aaKnown RBP23.16■■□□□ 1.3
COL13A1-210ENST00000517713 ZDHHC11Q9H8X9 412 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 TGM6O95932 706 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 C1QBP02746 253 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 UBBP0CG47 229 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 CEACAM1P13688 526 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 RCVRNP35243 200 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 APH1AQ96BI3 265 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 WDYHV1Q96HA8 205 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 PRRX2Q99811 253 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 SPRR3Q9UBC9 169 aa23.16■■□□□ 1.3
COL13A1-210ENST00000517713 EP300Q09472 2414 aaPredicted RBP23.15■■□□□ 1.3
COL13A1-210ENST00000517713 A0A1B0GUH1 482 aa23.15■■□□□ 1.3
COL13A1-210ENST00000517713 DHRS7CA6NNS2 312 aa23.15■■□□□ 1.3
COL13A1-210ENST00000517713 HPXP02790 462 aa23.15■■□□□ 1.3
COL13A1-210ENST00000517713 CPN1P15169 458 aa23.15■■□□□ 1.3
COL13A1-210ENST00000517713 RBMS2Q15434 407 aaKnown RBP23.15■■□□□ 1.3
COL13A1-210ENST00000517713 METTL11BQ5VVY1 283 aa23.15■■□□□ 1.3
COL13A1-210ENST00000517713 LIX1LQ8IVB5 337 aa23.15■■□□□ 1.3
COL13A1-210ENST00000517713 TMEM104Q8NE00 496 aa23.15■■□□□ 1.3
COL13A1-210ENST00000517713 OR10R2Q8NGX6 335 aa23.15■■□□□ 1.3
COL13A1-210ENST00000517713 LPAR5Q9H1C0 372 aa23.15■■□□□ 1.3
COL13A1-210ENST00000517713 UPB1Q9UBR1 384 aa23.15■■□□□ 1.3
COL13A1-210ENST00000517713 CDC14BO60729 498 aa23.15■■□□□ 1.3
COL13A1-210ENST00000517713 MPIG6BO95866 241 aa23.15■■□□□ 1.3
COL13A1-210ENST00000517713 CHRM2P08172 466 aa23.15■■□□□ 1.3
COL13A1-210ENST00000517713 PABPC1L2AQ5JQF8 200 aa23.15■■□□□ 1.3
COL13A1-210ENST00000517713 C9orf135Q5VTT2 229 aa23.15■■□□□ 1.3
COL13A1-210ENST00000517713 ZNF107Q9UII5 783 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms