RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 BLOC1S5-TXNDC5H3BN57 136 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 C19orf84I3L1E1 186 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 J3QR06 171 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 GPR171O14626 319 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 TRIAP1O43715 76 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 CHP2O43745 196 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 TIMM8AO60220 97 aaPredicted RBP2.39□□□□□ -2.03
SKP1-204ENST00000517691 RAMP1O60894 148 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 SS18L1O75177 396 aaPredicted RBP2.39□□□□□ -2.03
SKP1-204ENST00000517691 MRPL33O75394 65 aaKnown RBP2.39□□□□□ -2.03
SKP1-204ENST00000517691 TNFSF13O75888 250 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 DIRAS1O95057 198 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 IGHV3-9P01782 118 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 THY1P04216 161 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 FABP3P05413 133 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 H1F0P07305 194 aaKnown RBP2.39□□□□□ -2.03
SKP1-204ENST00000517691 OR2T7P0C7T2 308 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 FCGR1AP12314 374 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 CCL2P13500 99 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 NQO2P16083 231 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 ZNF43P17038 809 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 ITGA2P17301 1181 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 ZFP36P26651 326 aaKnown RBP2.39□□□□□ -2.03
SKP1-204ENST00000517691 GRPRP30550 384 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 ERFP50548 548 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 DLX5P56178 289 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 SMIM11AP58511 58 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 SSTP61278 116 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 MS4A2Q01362 244 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 CHRNB3Q05901 458 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 FAM27E3Q08E93 113 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 MADCAM1Q13477 382 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 MFSD13AQ14CX5 517 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 TRAM2Q15035 370 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 ESCO2Q56NI9 601 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 FGD3Q5JSP0 725 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 ZNF770Q6IQ21 691 aaPredicted RBP2.39□□□□□ -2.03
SKP1-204ENST00000517691 KCNIP4Q6PIL6 250 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 PAQR6Q6TCH4 344 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 C5orf46Q6UWT4 87 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 CASP12Q6UXS9 341 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 ZNF730Q6ZMV8 503 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 COLCA1Q6ZS62 124 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 IL17RELQ6ZVW7 336 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 NUFIP2Q7Z417 695 aaKnown RBP2.39□□□□□ -2.03
SKP1-204ENST00000517691 CCDC36Q8IYA8 594 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 PARP16Q8N5Y8 322 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 RELL2Q8NC24 303 aaPredicted RBP2.39□□□□□ -2.03
SKP1-204ENST00000517691 ADPRHL1Q8NDY3 354 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 PFN4Q8NHR9 129 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 MFSD8Q8NHS3 518 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 RNF128Q8TEB7 428 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 SCARB1Q8WTV0 552 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 TMEM239Q8WW34 195 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 PHYHIPQ92561 330 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 RNASE6Q93091 150 aaKnown RBP2.39□□□□□ -2.03
SKP1-204ENST00000517691 SGTBQ96EQ0 304 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 BOD1Q96IK1 185 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 ZNF48Q96MX3 618 aaPredicted RBP2.39□□□□□ -2.03
SKP1-204ENST00000517691 PSD2Q9BQI7 771 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 POLR2J2Q9GZM3 115 aaKnown RBP2.39□□□□□ -2.03
SKP1-204ENST00000517691 NDEL1Q9GZM8 345 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 POLR2J3Q9H1A7 115 aaKnown RBP2.39□□□□□ -2.03
SKP1-204ENST00000517691 NMNAT1Q9HAN9 279 aaPredicted RBP2.39□□□□□ -2.03
SKP1-204ENST00000517691 C12orf10Q9HB07 376 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 NANSQ9NR45 359 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 MAN2C1Q9NTJ4 1040 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 PARPBPQ9NWS1 579 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 DKK2Q9UBU2 259 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 SEC14L4Q9UDX3 406 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 POFUT2Q9Y2G5 429 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 MED31Q9Y3C7 131 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 TESMINQ9Y4I5 508 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 ENPP4Q9Y6X5 453 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 USP9XQ93008 2570 aaPredicted RBP2.39□□□□□ -2.03
SKP1-204ENST00000517691 NUP214P35658 2090 aaPredicted RBP2.39□□□□□ -2.03
SKP1-204ENST00000517691 NINQ8N4C6 2090 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 CIB4A0PJX0 185 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 KRTAP23-1A1A580 65 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 TUBAL3A6NHL2 446 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 SNTNA6NMZ2 147 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 ZNF726A6NNF4 738 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 ZNF724A8MTY0 619 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 MS4A18H0YCH9 400 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 C16orf97H3BN30 126 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 M0QZ24 198 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 PLPP3O14495 311 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 GNGT2O14610 69 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 FFAR1O14842 300 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 CASKO14936 926 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 NPIPB7O75200 414 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 RBBP9O75884 186 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 NCR1O76036 304 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 OR7A10O76100 309 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 VAMP5O95183 116 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 GADD45GO95257 159 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 LYPD3O95274 346 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 CST1P01037 141 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 CGAP01215 116 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 HLA-DQA2P01906 255 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms