RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 NSMCE2Q96MF7 247 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 TAPBPLQ9BX59 468 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 TXNIPQ9H3M7 391 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 NUDT15Q9NV35 164 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 TCEAL9Q9UHQ7 104 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 PSMD13Q9UNM6 376 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 MCM3APO60318 1980 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 CASP8AP2Q9UKL3 1982 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 IGHV2-70DA0A0C4DH43 119 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 K7ERS5 55 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 L7N2F9 121 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 M0R2N4 97 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 ARPC1BO15143 372 aaKnown RBP-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 NOS1APO75052 506 aaPredicted RBP-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 ATP9AO75110 1047 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 TOM1L1O75674 476 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 B3GAT3O94766 335 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 PABPC4LP0CB38 370 aaKnown RBP-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 GABRA1P14867 456 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 SAT1P21673 171 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 MIPP30301 263 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 NUP62P37198 522 aaPredicted RBP-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 PTGFRP43088 359 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 GSSP48637 474 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 DAP3P51398 398 aaKnown RBP-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 GPX6P59796 221 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 RCAN2Q14206 197 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 PCLAFQ15004 111 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 MPP7Q5T2T1 576 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 SOSTDC1Q6X4U4 206 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 TRMT10CQ7L0Y3 403 aaKnown RBP-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 MDP1Q86V88 176 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 TICAM2Q86XR7 235 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 PDPNQ86YL7 162 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 C15orf54Q8N8G6 183 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 COX18Q8N8Q8 333 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 ACOT4Q8N9L9 421 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 TRPV1Q8NER1 839 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 HTR3CQ8WXA8 447 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 RAB39BQ96DA2 213 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 SEH1LQ96EE3 360 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 SAMD10Q9BYL1 202 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 LMAN1LQ9HAT1 526 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 UFSP2Q9NUQ7 469 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 TXNL4BQ9NX01 149 aaKnown RBP-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 SNX7Q9UNH6 387 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 STARD10Q9Y365 291 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 RPL36Q9Y3U8 105 aaKnown RBP-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 PCDHGB3Q9Y5G1 929 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 HEY1Q9Y5J3 304 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 COL6A5A8TX70 2615 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 NAV1Q8NEY1 1877 aa-2.54□□□□□ -2.82
SNORA40.16-201ENST00000517238 TRBV24-1A0A075B6N3 115 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 MEIS3P1A6NDR6 274 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 CCDC182A6NF36 153 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 LOC730098B7Z3J9 87 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 KBTBD13C9JR72 458 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 CTDSPLO15194 276 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 ALOX15BO15296 676 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 GMNNO75496 209 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 CXorf1O96002 111 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 PCMT1P22061 227 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 TM4SF1P30408 202 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 MC5RP33032 325 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 SERPINB5P36952 375 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 CCT5P48643 541 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 AP3M2P53677 418 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 SLC26A5P58743 744 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 MYBPC1Q00872 1141 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 PSG9Q00887 426 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 ATP5G2Q06055 141 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 ACTN3Q08043 901 aaPredicted RBP-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 ESPL1Q14674 2120 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 MESDQ14696 234 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 OR7A5Q15622 319 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 SCN9AQ15858 1988 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 KYNUQ16719 465 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 TSTQ16762 297 aaKnown RBP-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 FAM91A1Q658Y4 838 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 HAUS3Q68CZ6 603 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 HIST2H2AA3Q6FI13 130 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 GALNTL5Q7Z4T8 443 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 FANCMQ8IYD8 2048 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 LIX1Q8N485 282 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 MS4A15Q8N5U1 240 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 FNDC5Q8NAU1 212 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 OR10A7Q8NGE5 316 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 OR10J6PQ8NGY7 276 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 TSR2Q969E8 191 aaKnown RBP-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 RRP36Q96EU6 259 aaKnown RBP-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 OXGR1Q96P68 337 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 SERPINI1Q99574 410 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 NUP58Q9BVL2 599 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 TLNRD1Q9H1K6 362 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 NRBP2Q9NSY0 501 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 SPASTQ9UBP0 616 aa-2.55□□□□□ -2.82
SNORA40.16-201ENST00000517238 FAM74A7A6NL05 159 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 HTR2CP28335 458 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 GCH1P30793 250 aa-2.56□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms