RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 TEX29Q8N6K0 151 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 DEFB108BQ8NET1 73 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 BBS1Q8NFJ9 593 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 OR8B3Q8NGG8 313 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 OTOSQ8NHW6 89 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 NRG4Q8WWG1 115 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 C22orf15Q8WYQ4 148 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 REEP6Q96HR9 211 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 HRASLS5Q96KN8 279 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 OR8B2Q96RD0 313 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 SIGLEC11Q96RL6 698 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 MBOAT4Q96T53 435 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 AMELYQ99218 206 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 CIB1Q99828 191 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 RBM4BQ9BQ04 359 aaKnown RBP5.47□□□□□ -1.53
KDM3B-208ENST00000512928 C9orf16Q9BUW7 83 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 C19orf24Q9BVV8 132 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 PAPOLGQ9BWT3 736 aaKnown RBP5.47□□□□□ -1.53
KDM3B-208ENST00000512928 PRRG3Q9BZD7 231 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 SLC22A4Q9H015 551 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 OR10A2Q9H208 303 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 SEMA6AQ9H2E6 1030 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 TOR3AQ9H497 397 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 OPA3Q9H6K4 179 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 SP140LQ9H930 580 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 MARCH7Q9H992 704 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 FN3KRPQ9HA64 309 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 G6PC2Q9NQR9 355 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 C1orf123Q9NWV4 160 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 LAMP5Q9UJQ1 280 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 GTF2A1LQ9UNN4 478 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 NOP16Q9Y3C1 178 aaKnown RBP5.47□□□□□ -1.53
KDM3B-208ENST00000512928 PPIAL4AQ9Y536 164 aa5.47□□□□□ -1.53
KDM3B-208ENST00000512928 MALRD1Q5VYJ5 2156 aa5.46□□□□□ -1.53
KDM3B-208ENST00000512928 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.46□□□□□ -1.542e-6■■■■□ 24
KDM3B-208ENST00000512928 TANC2Q9HCD6 1990 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 SAC3D1A6NKF1 404 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 CEACAM18A8MTB9 384 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 C3orf80F5H4A9 247 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 J3QLI3 93 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 SLC16A6O15403 523 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 GMDSO60547 372 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 MITFO75030 526 aaPredicted RBP5.46□□□□□ -1.54
KDM3B-208ENST00000512928 AVPP01185 164 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 GATA3P23771 443 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 ZFP36P26651 326 aaKnown RBP5.46□□□□□ -1.54
KDM3B-208ENST00000512928 OTX1P32242 354 aaPredicted RBP5.46□□□□□ -1.54
KDM3B-208ENST00000512928 CD80P33681 288 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 OPRL1P41146 370 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 HCCSP53701 268 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 CRISP1P54107 249 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 GMFBP60983 142 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 HOXA4Q00056 320 aaPredicted RBP5.46□□□□□ -1.54
KDM3B-208ENST00000512928 MZT1Q08AG7 82 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 PTGES3Q15185 160 aaKnown RBP5.46□□□□□ -1.54
KDM3B-208ENST00000512928 MPPED2Q15777 294 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 SLC35D3Q5M8T2 416 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 BTNL3Q6UXE8 466 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 LRRN1Q6UXK5 716 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 KCTD8Q6ZWB6 473 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 NLRC3Q7RTR2 1065 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 SLC16A9Q7RTY1 509 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 TIGD4Q8IY51 512 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 FTMTQ8N4E7 242 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 OR52H1Q8NGJ2 320 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 NANPQ8TBE9 248 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 ZNF418Q8TF45 676 aaPredicted RBP5.46□□□□□ -1.54
KDM3B-208ENST00000512928 FBLIM1Q8WUP2 373 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 RNF133Q8WVZ7 376 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 TECTBQ96PL2 329 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 MRI1Q9BV20 369 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 SSBP3Q9BWW4 388 aaPredicted RBP5.46□□□□□ -1.54
KDM3B-208ENST00000512928 TMPRSS13Q9BYE2 586 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 RIBC2Q9H4K1 309 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 PATZ1Q9HBE1 687 aaKnown RBP5.46□□□□□ -1.54
KDM3B-208ENST00000512928 MMP26Q9NRE1 261 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 C14orf119Q9NWQ9 140 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 MRPL15Q9P015 296 aaKnown RBP5.46□□□□□ -1.54
KDM3B-208ENST00000512928 H2AFY2Q9P0M6 372 aaPredicted RBP5.46□□□□□ -1.54
KDM3B-208ENST00000512928 RNF7Q9UBF6 113 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 ENOPH1Q9UHY7 261 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 IKZF2Q9UKS7 526 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 KLHDC2Q9Y2U9 406 aa5.46□□□□□ -1.54
KDM3B-208ENST00000512928 DYSFO75923 2080 aa5.45□□□□□ -1.54
KDM3B-208ENST00000512928 IGHV3OR15-7A0A075B7D8 119 aa5.45□□□□□ -1.54
KDM3B-208ENST00000512928 IGHV3OR16-10A0A075B7F0 116 aa5.45□□□□□ -1.54
KDM3B-208ENST00000512928 ANXA2P2A6NMY6 339 aa5.45□□□□□ -1.54
KDM3B-208ENST00000512928 PRKYO43930 277 aa5.45□□□□□ -1.54
KDM3B-208ENST00000512928 CFL1P23528 166 aaKnown RBP5.45□□□□□ -1.54
KDM3B-208ENST00000512928 CALRP27797 417 aaKnown RBP5.45□□□□□ -1.54
KDM3B-208ENST00000512928 THBS2P35442 1172 aa5.45□□□□□ -1.54
KDM3B-208ENST00000512928 POLR2IP36954 125 aaKnown RBP5.45□□□□□ -1.54
KDM3B-208ENST00000512928 PMELP40967 661 aa5.45□□□□□ -1.54
KDM3B-208ENST00000512928 CD200P41217 278 aa5.45□□□□□ -1.54
KDM3B-208ENST00000512928 GATA4P43694 442 aa5.45□□□□□ -1.54
KDM3B-208ENST00000512928 PITPNBP48739 271 aa5.45□□□□□ -1.54
KDM3B-208ENST00000512928 GSK3AP49840 483 aa5.45□□□□□ -1.54
KDM3B-208ENST00000512928 ADARB1P78563 741 aaKnown RBP5.45□□□□□ -1.54
KDM3B-208ENST00000512928 FAM3AP98173 230 aa5.45□□□□□ -1.54
KDM3B-208ENST00000512928 SLC34A1Q06495 639 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms