RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 MAGEL2Q9UJ55 1249 aa5.98□□□□□ -1.45
USP46-208ENST00000512656 MMP24Q9Y5R2 645 aa5.98□□□□□ -1.45
USP46-208ENST00000512656 IGHV3OR16-10A0A075B7F0 116 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 TRAV38-1A0A0B4J264 116 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 GGT3PA6NGU5 568 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 CD300LBA8K4G0 201 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 SRRM5B3KS81 715 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 M0R135 149 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 LGALS8O00214 317 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 HOXA3O43365 443 aaPredicted RBP5.97□□□□□ -1.45
USP46-208ENST00000512656 FAM20BO75063 409 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 DIRAS1O95057 198 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 HLA-DPB1P04440 258 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 HIST1H1CP16403 213 aaKnown RBP5.97□□□□□ -1.45
USP46-208ENST00000512656 CA6P23280 308 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 PRDX6P30041 224 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 GGT2P36268 569 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 RBMXP38159 391 aaKnown RBP5.97□□□□□ -1.45
USP46-208ENST00000512656 PSMB10P40306 273 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 PMELP40967 661 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 FGF12P61328 243 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 SPIBQ01892 262 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 TSPAN31Q12999 210 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 MAB21L1Q13394 359 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 OR8B8Q15620 311 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 RSPO1Q2MKA7 263 aaPredicted RBP5.97□□□□□ -1.45
USP46-208ENST00000512656 DEFB112Q30KQ8 113 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 FAM201AQ5SY85 155 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 RPL13AP3Q6NVV1 102 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 DRAM2Q6UX65 266 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 CFAP77Q6ZQR2 320 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 C17orf107Q6ZR85 190 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 LINC00346Q8IVM7 164 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 LINC00471Q8N535 108 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 FITM2Q8N6M3 262 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 PNLDC1Q8NA58 520 aaKnown RBP5.97□□□□□ -1.45
USP46-208ENST00000512656 PROKR2Q8NFJ6 384 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 OR52L1Q8NGH7 329 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 OR2T4Q8NH00 348 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 PPP1R14AQ96A00 147 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 ZNF799Q96GE5 643 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 PCGF1Q9BSM1 259 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 FUZQ9BT04 418 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 ADAT1Q9BUB4 502 aaKnown RBP5.97□□□□□ -1.45
USP46-208ENST00000512656 NSRP1Q9H0G5 558 aaKnown RBP5.97□□□□□ -1.45
USP46-208ENST00000512656 PRDM13Q9H4Q3 707 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 OPA3Q9H6K4 179 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 MED4Q9NPJ6 270 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 UFSP2Q9NUQ7 469 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 C14orf119Q9NWQ9 140 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 MRPL15Q9P015 296 aaKnown RBP5.97□□□□□ -1.45
USP46-208ENST00000512656 POMT1Q9Y6A1 747 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 DOCK11Q5JSL3 2073 aa5.97□□□□□ -1.45
USP46-208ENST00000512656 WNK1Q9H4A3 2382 aa5.96□□□□□ -1.45
USP46-208ENST00000512656 OR6C68A6NDL8 312 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 ZNF879B4DU55 563 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 ADAM20O43506 726 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 KRT36O76013 467 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 TOX4O94842 621 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 PTBP3O95758 552 aaKnown RBP5.96□□□□□ -1.46
USP46-208ENST00000512656 ECDO95905 644 aaPredicted RBP5.96□□□□□ -1.46
USP46-208ENST00000512656 KNG1P01042 644 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 FABP3P05413 133 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 MDKP21741 143 aaPredicted RBP5.96□□□□□ -1.46
USP46-208ENST00000512656 RRM2P31350 389 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 GRK5P34947 590 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 DDOSTP39656 456 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 GSSP48637 474 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 RPL15P61313 204 aaKnown RBP5.96□□□□□ -1.46
USP46-208ENST00000512656 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.96□□□□□ -1.46
USP46-208ENST00000512656 PDCD1Q15116 288 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 TAF13Q15543 124 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 SAMD4BQ5PRF9 694 aaKnown RBP5.96□□□□□ -1.46
USP46-208ENST00000512656 CLEC12AQ5QGZ9 265 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 SLC35F1Q5T1Q4 408 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 METTL11BQ5VVY1 283 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 PRAMEF6Q5VXH4 476 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 LYPD2Q6UXB3 125 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 BRD3OSQ6XYD6 125 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 ZNF841Q6ZN19 808 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 ZNF620Q6ZNG0 422 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 FAM86B1Q8N7N1 296 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 SDR9C7Q8NEX9 313 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 TBC1D15Q8TC07 691 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 GNPDA2Q8TDQ7 276 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 SSMEM1Q8WWF3 244 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 NSMCE2Q96MF7 247 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 TRIM15Q9C019 465 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 SP140LQ9H930 580 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 PNRC2Q9NPJ4 139 aaKnown RBP5.96□□□□□ -1.46
USP46-208ENST00000512656 CDH10Q9Y6N8 788 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 V9GYQ6 96 aa5.96□□□□□ -1.46
USP46-208ENST00000512656 OOEPA6NGQ2 149 aa5.95□□□□□ -1.46
USP46-208ENST00000512656 A6NLC8 198 aa5.95□□□□□ -1.46
USP46-208ENST00000512656 ANKRD30BLA7E2S9 258 aa5.95□□□□□ -1.46
USP46-208ENST00000512656 M0QZ24 198 aa5.95□□□□□ -1.46
USP46-208ENST00000512656 BHLHE40O14503 412 aa5.95□□□□□ -1.46
USP46-208ENST00000512656 TNFRSF13BO14836 293 aaPredicted RBP5.95□□□□□ -1.46
USP46-208ENST00000512656 TIMM23O14925 209 aa5.95□□□□□ -1.46
USP46-208ENST00000512656 KCNAB3O43448 404 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms