RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 NOTOA8MTQ0 251 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 LOC110117498-PIK3R3F6TDL0 507 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 PDCD5O14737 125 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 MAGEB4O15481 346 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 TCF21O43680 179 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 TPPPO94811 219 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 PNPP00491 289 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 IGHV4-31P0DP07 118 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 HOXB1P14653 301 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 ZNF12P17014 697 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 AGTR1P30556 359 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 S100A5P33763 92 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 RPS27P42677 84 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 RANBP1P43487 201 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 OR3A2P47893 321 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 RIN1Q13671 783 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 HSD17B12Q53GQ0 312 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 ELFN2Q5R3F8 820 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 CARD17Q5XLA6 110 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 OR7E24Q6IFN5 339 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 KLHL24Q6TFL4 600 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 CFAP77Q6ZQR2 320 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 PRSS45Q7RTY3 260 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 CCDC36Q8IYA8 594 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 ZNF676Q8N7Q3 588 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 C3orf56Q8N813 242 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 FBXW5Q969U6 566 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 C10orf35Q96D05 121 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 KCNJ15Q99712 375 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 SP140LQ9H930 580 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 SEC61A2Q9H9S3 476 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 CRLF2Q9HC73 371 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 RABL2AQ9UBK7 228 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 OR52A1Q9UKL2 312 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 HHLA2Q9UM44 414 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 RABL2BQ9UNT1 228 aa9.06□□□□□ -0.96
PDLIM5-217ENST00000512274 ANK2Q01484 3957 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 TMEM269A0A1B0GVZ9 245 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 LOC390937A0A1W2PQ73 354 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 OR6C6A6NF89 314 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 ZNF587BE7ETH6 402 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 PIN1P1O15428 100 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 ALX3O95076 343 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 FARS2O95363 451 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 WNT11O96014 354 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 CD2P06729 351 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 MMP7P09237 267 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 DANCRP0C864 163 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 SRMP19623 302 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 CALRP27797 417 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 CDAP32320 146 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 PSMB10P40306 273 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 KIR2DL2P43627 348 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 PPP3R1P63098 170 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 LOXL1Q08397 574 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 HNRNPA0Q13151 305 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 CEACAM16Q2WEN9 425 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 CCDC92Q53HC0 331 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 CEP78Q5JTW2 689 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 DDI2Q5TDH0 399 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 TSPO2Q5TGU0 170 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 FBXW9Q5XUX1 488 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 SFXN4Q6P4A7 337 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 MZT2AQ6P582 158 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 METAP1DQ6UB28 335 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 DRAM2Q6UX65 266 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 LINGO2Q7L985 606 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 LINC00346Q8IVM7 164 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 TUSC5Q8IXB3 177 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 CDH26Q8IXH8 852 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 SLC22A24Q8N4F4 322 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 PARP16Q8N5Y8 322 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 PLPP7Q8NBV4 271 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 OR14A2Q96R54 314 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 ATF6BQ99941 703 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 TMEM204Q9BSN7 226 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 PRRG4Q9BZD6 226 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 PPIL3Q9H2H8 161 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 SMURF1Q9HCE7 757 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 EMC7Q9NPA0 242 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 SLC17A5Q9NRA2 495 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 SLC7A10Q9NS82 523 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 ABRACLQ9P1F3 81 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 KCNS2Q9ULS6 477 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 CLEC4AQ9UMR7 237 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 POLR1DQ9Y2S0 133 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 TIMM10BQ9Y5J6 103 aa9.05□□□□□ -0.96
PDLIM5-217ENST00000512274 MEGF11A6BM72 1044 aa9.04□□□□□ -0.96
PDLIM5-217ENST00000512274 J3QW42 95 aa9.04□□□□□ -0.96
PDLIM5-217ENST00000512274 SYNGR3O43761 229 aa9.04□□□□□ -0.96
PDLIM5-217ENST00000512274 RPP14O95059 124 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-217ENST00000512274 TTRP02766 147 aa9.04□□□□□ -0.96
PDLIM5-217ENST00000512274 OCM2P0CE71 109 aa9.04□□□□□ -0.96
PDLIM5-217ENST00000512274 IGFBP3P17936 291 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-217ENST00000512274 RAB3BP20337 219 aa9.04□□□□□ -0.96
PDLIM5-217ENST00000512274 MPGP29372 298 aa9.04□□□□□ -0.96
PDLIM5-217ENST00000512274 CAPZA1P52907 286 aa9.04□□□□□ -0.96
PDLIM5-217ENST00000512274 PPP5CP53041 499 aa9.04□□□□□ -0.96
PDLIM5-217ENST00000512274 MFGE8Q08431 387 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms