RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 U3KQK5 164 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 ACOT8O14734 319 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 PEX14O75381 377 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 TAS2R41P59536 307 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 SELENOWP63302 87 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 FLOT2Q14254 428 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 GK2Q14410 553 aaPredicted RBP9.41□□□□□ -0.9
RNF4-216ENST00000511859 ANKDD1AQ495B1 522 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 CBLL1Q75N03 491 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 SLC36A1Q7Z2H8 476 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 Q8N2B8 174 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 GCSAMQ8N6F7 178 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 LRRC75AQ8NAA5 344 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 GJC3Q8NFK1 279 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 SPRYD4Q8WW59 207 aaPredicted RBP9.41□□□□□ -0.9
RNF4-216ENST00000511859 LZICQ8WZA0 190 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 ASB9Q96DX5 294 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 LRGUKQ96M69 825 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 COQ7Q99807 217 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 GORASP2Q9H8Y8 452 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 DCAF13Q9NV06 445 aaKnown RBP9.41□□□□□ -0.9
RNF4-216ENST00000511859 DNAJB11Q9UBS4 358 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 RPS6KA6Q9UK32 745 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 BAG5Q9UL15 447 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 POMPQ9Y244 141 aa9.41□□□□□ -0.9
RNF4-216ENST00000511859 SF3B6Q9Y3B4 125 aaKnown RBP9.41□□□□□ -0.9
RNF4-216ENST00000511859 TEX13CA0A0J9YWL9 993 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 RER1O15258 196 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 MUC1P15941 1255 aaPredicted RBP9.4□□□□□ -0.9
RNF4-216ENST00000511859 CA6P23280 308 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 YAP1P46937 504 aaKnown RBP9.4□□□□□ -0.9
RNF4-216ENST00000511859 MZT1Q08AG7 82 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 MALLQ13021 153 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 KLRD1Q13241 179 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 MICBQ29980 383 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 C1orf146Q5VVC0 180 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 PGAP1Q75T13 922 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 SPATA24Q86W54 205 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 C8orf46Q8TAG6 207 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 ACOT11Q8WXI4 607 aaPredicted RBP9.4□□□□□ -0.9
RNF4-216ENST00000511859 SLCO4A1Q96BD0 722 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 DCTN5Q9BTE1 182 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 CDCA4Q9BXL8 241 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 HDHD2Q9H0R4 259 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 METTL8Q9H825 291 aaKnown RBP9.4□□□□□ -0.9
RNF4-216ENST00000511859 C1orf123Q9NWV4 160 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 RIMS3Q9UJD0 308 aa9.4□□□□□ -0.9
RNF4-216ENST00000511859 SAMD4AQ9UPU9 718 aaKnown RBP9.4□□□□□ -0.9
RNF4-216ENST00000511859 TCRBV5S2A0A599 114 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 J3KTA2 159 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 M0R1W7 72 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 XKRYO14609 159 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 NDUFB3O43676 98 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 CIB2O75838 187 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 DIRAS1O95057 198 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 OR5F1O95221 314 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 PF4V1P10720 104 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 PAICSP22234 425 aaKnown RBP9.39□□□□□ -0.91
RNF4-216ENST00000511859 HIST1H3AP68431 136 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 PRB3Q04118 309 aaPredicted RBP9.39□□□□□ -0.91
RNF4-216ENST00000511859 POU4F2Q12837 409 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 TRAP1Q12931 704 aaKnown RBP9.39□□□□□ -0.91
RNF4-216ENST00000511859 BLMHQ13867 455 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 IFI44LQ53G44 452 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 LRRC10Q5BKY1 277 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 HIST2H3PS2Q5TEC6 136 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 LCN8Q6JVE9 175 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 HIST2H3AQ71DI3 136 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 GLB1L2Q8IW92 636 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 PNKDQ8N490 385 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 BPIFA2Q96DR5 249 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 PYURFQ96I23 114 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 DDOQ99489 341 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 GPR61Q9BZJ8 451 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 WNT10AQ9GZT5 417 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 MUC13Q9H3R2 512 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 ZNF702PQ9H963 129 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 GRHPRQ9UBQ7 328 aa9.39□□□□□ -0.91
RNF4-216ENST00000511859 PRSS37A4D1T9 235 aa9.38□□□□□ -0.91
RNF4-216ENST00000511859 H7C1C5 153 aa9.38□□□□□ -0.91
RNF4-216ENST00000511859 ZFPL1O95159 310 aa9.38□□□□□ -0.91
RNF4-216ENST00000511859 CTLA4P16410 223 aa9.38□□□□□ -0.91
RNF4-216ENST00000511859 DLX1P56177 255 aa9.38□□□□□ -0.91
RNF4-216ENST00000511859 LCN6P62502 163 aa9.38□□□□□ -0.91
RNF4-216ENST00000511859 CD83Q01151 205 aa9.38□□□□□ -0.91
RNF4-216ENST00000511859 ECH1Q13011 328 aa9.38□□□□□ -0.91
RNF4-216ENST00000511859 PIN1Q13526 163 aaPredicted RBP9.38□□□□□ -0.91
RNF4-216ENST00000511859 KCNMB1Q16558 191 aa9.38□□□□□ -0.91
RNF4-216ENST00000511859 RSPO1Q2MKA7 263 aaPredicted RBP9.38□□□□□ -0.91
RNF4-216ENST00000511859 ZNF826PQ6ZT77 177 aa9.38□□□□□ -0.91
RNF4-216ENST00000511859 FGFRL1Q8N441 504 aa9.38□□□□□ -0.91
RNF4-216ENST00000511859 OR51A7Q8NH64 312 aa9.38□□□□□ -0.91
RNF4-216ENST00000511859 RORBQ92753 470 aa9.38□□□□□ -0.91
RNF4-216ENST00000511859 DPF1Q92782 380 aa9.38□□□□□ -0.91
RNF4-216ENST00000511859 RSRC1Q96IZ7 334 aaKnown RBP9.38□□□□□ -0.91
RNF4-216ENST00000511859 CCL13Q99616 98 aa9.38□□□□□ -0.91
RNF4-216ENST00000511859 NKX3-1Q99801 234 aaPredicted RBP9.38□□□□□ -0.91
RNF4-216ENST00000511859 ADAT1Q9BUB4 502 aaKnown RBP9.38□□□□□ -0.91
RNF4-216ENST00000511859 RHCGQ9UBD6 479 aa9.38□□□□□ -0.91
RNF4-216ENST00000511859 PCDHGB5Q9Y5G0 923 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms