RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 SHARPINQ9H0F6 387 aa12.57□□□□□ -0.4
AP003555.1-202ENST00000511013 CHCHD2Q9Y6H1 151 aaPredicted RBP12.57□□□□□ -0.4
AP003555.1-202ENST00000511013 FAM25EA8MYX2 175 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 VAMP5O95183 116 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 APOC1P02654 83 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 SLC2A1P11166 492 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 PRF1P14222 555 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 MSR1P21757 451 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 OR3A4PP47883 348 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 CSNK1A1P48729 337 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 ARL6IP1Q15041 203 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 PCOLCEQ15113 449 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 EXT1Q16394 746 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 TUSC1Q2TAM9 212 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 SLC22A6Q4U2R8 563 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 KCTD9Q7L273 389 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 TMEM17Q86X19 198 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 GJC3Q8NFK1 279 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 OR14K1Q8NGZ2 314 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 CASTOR1Q8WTX7 329 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 C1orf147Q96MC9 270 aaPredicted RBP12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 NICN1Q9BSH3 213 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 TRIOO75962 3097 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 A0A0A6YYD4 124 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 A0A0B4J2A0 478 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 YKT6O15498 198 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 SOCS1O15524 211 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 CRTAPO75718 401 aaPredicted RBP12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 THBS4P35443 961 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 ATP1B3P54709 279 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 TMEM128Q5BJH2 165 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 C10orf128Q5T292 105 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 ADAD2Q8NCV1 583 aaKnown RBP12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 TMEM104Q8NE00 496 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 TMEM185AQ8NFB2 350 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 MARCH1Q8TCQ1 289 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 TMEM54Q969K7 222 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 INTS12Q96CB8 462 aaKnown RBP12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 SPACA5Q96QH8 159 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 ZNF416Q9BWM5 594 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 C1QTNF6Q9BXI9 259 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 OR10A2Q9H208 303 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 ZNF160Q9HCG1 818 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 ZNF319Q9P2F9 582 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 SHPKQ9UHJ6 478 aa12.56□□□□□ -0.4
AP003555.1-202ENST00000511013 A0A0U1RQV5 110 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 C5orf51A6NDU8 294 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 CEACAM18A8MTB9 384 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 RAMP1O60894 148 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 KLK3P07288 261 aaPredicted RBP12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 ZNF17P17021 662 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 PSMB6P28072 239 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 ALDH3B1P43353 468 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 ZNF133P52736 654 aaPredicted RBP12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 MICBQ29980 383 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 PLAC9Q5JTB6 97 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 PRAMEF20Q5VT98 475 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 FOXL2NBQ6ZUU3 175 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 MOB3CQ70IA8 216 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 FAM89BQ8N5H3 189 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 OR5H2Q8NGV7 314 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 OR10K1Q8NGX5 313 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 M1APQ8TC57 530 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 SSC4DQ8WTU2 575 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 HLA-CQ95604 372 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 ZNF471Q9BX82 626 aaPredicted RBP12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 ANGPTL4Q9BY76 406 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 ZNF700Q9H0M5 742 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 NELFAQ9H3P2 528 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 BANF2Q9H503 90 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 GAREM1Q9H706 876 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 OCIAD1Q9NX40 245 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 GPR132Q9UNW8 380 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 SIT1Q9Y3P8 196 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 EML6Q6ZMW3 1958 aa12.55□□□□□ -0.4
AP003555.1-202ENST00000511013 NCOA6Q14686 2063 aaPredicted RBP12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 A0A0C4DFX4 3053 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 RNF222A6NCQ9 220 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 DBX1A6NMT0 343 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 MFNGO00587 321 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 SMAD9O15198 467 aaKnown RBP12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 AVPR2P30518 371 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 LUMP51884 338 aaPredicted RBP12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 DSCR4P56555 118 aaPredicted RBP12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 TMEM50BP56557 158 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 TAS2R46P59540 309 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 CSNK2A1P68400 391 aaPredicted RBP12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 H3F3AP84243 136 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 ARFRP1Q13795 201 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 LRRC37A5PQ49AS3 106 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 RTL6Q6ICC9 239 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 CCDC36Q8IYA8 594 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 OR51T1Q8NGJ9 327 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 PP6455Q8WZ26 134 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 C10orf35Q96D05 121 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 DMRTA2Q96SC8 542 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 IER2Q9BTL4 223 aa12.54□□□□□ -0.4
AP003555.1-202ENST00000511013 NMES1Q9C002 83 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms