RNA–Protein interactions for RNA: ENST00000509563.1

CANX-215, Transcript of calnexin, human

TSL 4

Gene CANX, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CANX-215	ENST00000509563	SMIM10	Q96HG1	83 aa		4.54	□□□□□ -1.68
CANX-215	ENST00000509563	SLC45A3	Q96JT2	553 aa		4.54	□□□□□ -1.68
CANX-215	ENST00000509563	PAIP2	Q9BPZ3	127 aa	Known RBP	4.54	□□□□□ -1.68
CANX-215	ENST00000509563	LYRM4	Q9HD34	91 aa		4.54	□□□□□ -1.68
CANX-215	ENST00000509563	MED4	Q9NPJ6	270 aa		4.54	□□□□□ -1.68
CANX-215	ENST00000509563	EHF	Q9NZC4	300 aa		4.54	□□□□□ -1.68
CANX-215	ENST00000509563	VPS29	Q9UBQ0	182 aa		4.54	□□□□□ -1.68
CANX-215	ENST00000509563	ZNF282	Q9UDV7	671 aa	Predicted RBP	4.54	□□□□□ -1.68
CANX-215	ENST00000509563	PHF11	Q9UIL8	331 aa		4.54	□□□□□ -1.68
CANX-215	ENST00000509563	PCTP	Q9UKL6	214 aa		4.54	□□□□□ -1.68
CANX-215	ENST00000509563	WDFY3	Q8IZQ1	3526 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	TRGV8	A0A0C4DH27	118 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563		A0A1W2PPV4	95 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	TMEM120B	A0PK00	339 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	IFITM10	A6NMD0	228 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	TRDC	B7Z8K6	153 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	TEX46	H3BTG2	121 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	BCKDK	O14874	412 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	GALR3	O60755	368 aa	Predicted RBP	4.53	□□□□□ -1.68
CANX-215	ENST00000509563	MYO1D	O94832	1006 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	SEMA3D	O95025	777 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	SERPINE1	P05121	402 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	CHRNB4	P30926	498 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	CD80	P33681	288 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	HLCS	P50747	726 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	RAP1GDS1	P52306	607 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	ARHGDIA	P52565	204 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	BTN3A2	P78410	334 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	ST3GAL3	Q11203	375 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	ZNF154	Q13106	437 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	MRPL23	Q16540	153 aa	Known RBP	4.53	□□□□□ -1.68
CANX-215	ENST00000509563	TIGIT	Q495A1	244 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	EIPR1	Q53HC9	387 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	KHDRBS2	Q5VWX1	349 aa	Known RBP	4.53	□□□□□ -1.68
CANX-215	ENST00000509563	FAM219B	Q5XKK7	198 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	PVRIG	Q6DKI7	326 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	TIPARP	Q7Z3E1	657 aa	Known RBP	4.53	□□□□□ -1.68
CANX-215	ENST00000509563	VN1R4	Q7Z5H5	301 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	METTL4	Q8N3J2	472 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	ZNRF1	Q8ND25	227 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	ZNF740	Q8NDX6	193 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	OR5T3	Q8NGG3	340 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	OR2Y1	Q8NGV0	311 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	OR51Q1	Q8NH59	317 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	FAM76A	Q8TAV0	307 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	4.53	□□□□□ -1.68
CANX-215	ENST00000509563	DYDC1	Q8WWB3	177 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	TOMM40L	Q969M1	308 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	ZNF524	Q96C55	264 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	C8orf44	Q96CB5	159 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	MS4A6E	Q96DS6	147 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	MOCOS	Q96EN8	888 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	REEP4	Q9H6H4	257 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	C14orf105	Q9NVL8	296 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	DHCR7	Q9UBM7	475 aa	Known RBP	4.53	□□□□□ -1.68
CANX-215	ENST00000509563	RNF11	Q9Y3C5	154 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	RHBDD3	Q9Y3P4	386 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	GMEB1	Q9Y692	573 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	MDC1	Q14676	2089 aa	Known RBP	4.53	□□□□□ -1.68
CANX-215	ENST00000509563	PRRC2C	Q9Y520	2896 aa	Known RBP	4.53	□□□□□ -1.68
CANX-215	ENST00000509563	LAMA5	O15230	3695 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	ITPR1	Q14643	2758 aa		4.53	□□□□□ -1.68
CANX-215	ENST00000509563	SNRNP200	O75643	2136 aa	Known RBP	4.52	□□□□□ -1.69
CANX-215	ENST00000509563	MAP1B	P46821	2468 aa	Known RBP	4.52	□□□□□ -1.69
CANX-215	ENST00000509563	PIEZO2	Q9H5I5	2752 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	ASPM	Q8IZT6	3477 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	IGLV3-12	A0A075B6K2	115 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	IGHV3-38	A0A0C4DH36	116 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	SAGE2P	A6NJ88	616 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	VSTM2B	A6NLU5	285 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	PMS2P5	A8MQ11	134 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	C12orf71	A8MTZ7	269 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	IDS	B3KWA1	339 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563		K7ENP7	123 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	MANBA	O00462	879 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	AZIN1	O14977	448 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	ERI3	O43414	337 aa	Known RBP	4.52	□□□□□ -1.69
CANX-215	ENST00000509563	CHST10	O43529	356 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	HCRTR1	O43613	425 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	CTNS	O60931	367 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	PDYN	P01213	254 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	IGHG1	P01857	330 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	WNT2	P09544	360 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	COX5A	P20674	150 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	BCL3	P20749	454 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	HIST1H1T	P22492	207 aa	Predicted RBP	4.52	□□□□□ -1.69
CANX-215	ENST00000509563	TUBG1	P23258	451 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	OR1D4	P47884	311 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	RPL14	P50914	215 aa	Known RBP	4.52	□□□□□ -1.69
CANX-215	ENST00000509563	EMP2	P54851	167 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	PUDP	Q08623	228 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	SCRN3	Q0VDG4	424 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	SLAMF1	Q13291	335 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	IL18R1	Q13478	541 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	NCF4	Q15080	339 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	IMPG1	Q17R60	797 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	DEFB110	Q30KQ9	67 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	DEFB134	Q4QY38	66 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	SPIN4	Q56A73	249 aa		4.52	□□□□□ -1.69
CANX-215	ENST00000509563	FAM199X	Q6PEV8	388 aa	Predicted RBP	4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms