RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ZNF718Q3SXZ3 478 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 FAM201AQ5SY85 155 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 C6orf52Q5T4I8 152 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 PRAMEF6Q5VXH4 476 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 DRAM2Q6UX65 266 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 CLEC9AQ6UXN8 241 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 FAM57BQ71RH2 274 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 MEPCEQ7L2J0 689 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 SLC16A9Q7RTY1 509 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 BIVMQ86UB2 503 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 SLC35F2Q8IXU6 374 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF420Q8TAQ5 688 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 HPSE2Q8WWQ2 592 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 NEU4Q8WWR8 484 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 SGK3Q96BR1 496 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 ELMOD3Q96FG2 381 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 HRASLS5Q96KN8 279 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 RAB3IPQ96QF0 476 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 OR8B4Q96RC9 309 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 CNN2Q99439 309 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 KRTAP4-9Q9BYQ8 210 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 NARFLQ9H6Q4 476 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 G6PC2Q9NQR9 355 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 CENPMQ9NSP4 180 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 NKIRAS2Q9NYR9 191 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 EDARQ9UNE0 448 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 PMF1-BGLAPU3KQ54 211 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 HIVEP2P31629 2446 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 IGHV1-69-2A0A0G2JMI3 117 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 A0A1B0GW55 424 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 LOC390937A0A1W2PQ73 354 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 A0A1W2PQL4 384 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 CD300LBA8K4G0 201 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 CASQ2O14958 399 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 CD5LO43866 347 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 LMX1BO60663 402 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 PTBP3O95758 552 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 IGHV2-70P01814 119 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 TTRP02766 147 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 LCATP04180 440 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 LYNP07948 512 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 CSF3P09919 207 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 DUX4L2P0CJ85 424 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 DUX4L3P0CJ86 424 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 DUX4L4P0CJ87 422 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 DUX4L5P0CJ88 424 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 DUX4L6P0CJ89 424 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 DUX4L7P0CJ90 424 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 PAICSP22234 425 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 ACHEP22303 614 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 HTR1FP30939 366 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 KIR3DL2P43630 455 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 SLC6A9P48067 706 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 RGS6P49758 472 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 SEC61A1P61619 476 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 LMO4P61968 165 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 RPS7P62081 194 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF91Q05481 1191 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 ECH1Q13011 328 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 OR8B8Q15620 311 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 MPPED2Q15777 294 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 SMN1Q16637 294 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 OGFRL1Q5TC84 451 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 DUX4L9Q6RFH8 374 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 IL17RELQ6ZVW7 336 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF771Q7L3S4 317 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 PRIMA1Q86XR5 153 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF283Q8N7M2 679 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 CLRN3Q8NCR9 226 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 OR8G5Q8NG78 346 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 OR51G2Q8NGK0 314 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 OR2AJ1Q8NGZ0 328 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 RDH5Q92781 318 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 MSI2Q96DH6 328 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 OR2V2Q96R30 315 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 TBX5Q99593 518 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 APOL4Q9BPW4 351 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 PIMREGQ9BSJ6 248 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 RAB1BQ9H0U4 201 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 CHODLQ9H9P2 273 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 SAP30LQ9HAJ7 183 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 ELOVL3Q9HB03 270 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 ACOXLQ9NUZ1 547 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 HAO2Q9NYQ3 351 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 EIF3KQ9UBQ5 218 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 DUX4Q9UBX2 424 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 GPR160Q9UJ42 338 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF281Q9Y2X9 895 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 WIPI2Q9Y4P8 454 aa6.06□□□□□ -1.44
TOPBP1-207ENST00000509162 JMJD1CQ15652 2540 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 A0A1B0GTI1 187 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 F5H0A9 414 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 NDUFS8O00217 210 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 SLC16A6O15403 523 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 CYB5R3P00387 301 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 TFF1P04155 84 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 ANXA2P07355 339 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 GNAO1P09471 354 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 DBTP11182 482 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms