RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 DCDC5Q6ZRR9 648 aa15.64■□□□□ 0.09
UBE3D-207ENST00000509102 C1orf229Q6ZS94 237 aaPredicted RBP15.64■□□□□ 0.09
UBE3D-207ENST00000509102 ZDHHC13Q8IUH4 622 aa15.64■□□□□ 0.09
UBE3D-207ENST00000509102 CSNK2A3Q8NEV1 391 aa15.64■□□□□ 0.09
UBE3D-207ENST00000509102 UTP4Q969X6 686 aaKnown RBP15.64■□□□□ 0.09
UBE3D-207ENST00000509102 TMEM246Q9BRR3 403 aa15.64■□□□□ 0.09
UBE3D-207ENST00000509102 NTN4Q9HB63 628 aa15.64■□□□□ 0.09
UBE3D-207ENST00000509102 KRT84Q9NSB2 600 aa15.64■□□□□ 0.09
UBE3D-207ENST00000509102 AP4S1Q9Y587 144 aa15.64■□□□□ 0.09
UBE3D-207ENST00000509102 GRPP07492 148 aa15.63■□□□□ 0.09
UBE3D-207ENST00000509102 RBMXP38159 391 aaKnown RBP15.63■□□□□ 0.09
UBE3D-207ENST00000509102 SEC61A1P61619 476 aaKnown RBP15.63■□□□□ 0.09
UBE3D-207ENST00000509102 ZNF154Q13106 437 aa15.63■□□□□ 0.09
UBE3D-207ENST00000509102 APOFQ13790 326 aa15.63■□□□□ 0.09
UBE3D-207ENST00000509102 ATP6AP1Q15904 470 aa15.63■□□□□ 0.09
UBE3D-207ENST00000509102 USP43Q70EL4 1123 aa15.63■□□□□ 0.09
UBE3D-207ENST00000509102 KRT77Q7Z794 578 aa15.63■□□□□ 0.09
UBE3D-207ENST00000509102 ZFAND2BQ8WV99 257 aa15.63■□□□□ 0.09
UBE3D-207ENST00000509102 H2AFY2Q9P0M6 372 aaPredicted RBP15.63■□□□□ 0.09
UBE3D-207ENST00000509102 CLN8Q9UBY8 286 aa15.63■□□□□ 0.09
UBE3D-207ENST00000509102 ZNF391Q9UJN7 358 aa15.63■□□□□ 0.09
UBE3D-207ENST00000509102 INSIG2Q9Y5U4 225 aa15.63■□□□□ 0.09
UBE3D-207ENST00000509102 TMEM14AQ9Y6G1 99 aa15.63■□□□□ 0.09
UBE3D-207ENST00000509102 hCG_1807616A0A1W2PRN6 198 aa15.62■□□□□ 0.09
UBE3D-207ENST00000509102 C5orf63A6NC05 138 aa15.62■□□□□ 0.09
UBE3D-207ENST00000509102 PTBP3O95758 552 aaKnown RBP15.62■□□□□ 0.09
UBE3D-207ENST00000509102 ZNF12P17014 697 aa15.62■□□□□ 0.09
UBE3D-207ENST00000509102 PMELP40967 661 aa15.62■□□□□ 0.09
UBE3D-207ENST00000509102 PITPNBP48739 271 aa15.62■□□□□ 0.09
UBE3D-207ENST00000509102 DAPP51397 102 aa15.62■□□□□ 0.09
UBE3D-207ENST00000509102 FAM3AP98173 230 aa15.62■□□□□ 0.09
UBE3D-207ENST00000509102 PTGES3Q15185 160 aaKnown RBP15.62■□□□□ 0.09
UBE3D-207ENST00000509102 OR8B8Q15620 311 aa15.62■□□□□ 0.09
UBE3D-207ENST00000509102 MPPED2Q15777 294 aa15.62■□□□□ 0.09
UBE3D-207ENST00000509102 LRRN1Q6UXK5 716 aa15.62■□□□□ 0.09
UBE3D-207ENST00000509102 RBMS3Q6XE24 437 aaKnown RBP15.62■□□□□ 0.09
UBE3D-207ENST00000509102 BOLLQ8N9W6 283 aaKnown RBP15.62■□□□□ 0.09
UBE3D-207ENST00000509102 SGK3Q96BR1 496 aa15.62■□□□□ 0.09
UBE3D-207ENST00000509102 AMELYQ99218 206 aa15.62■□□□□ 0.09
UBE3D-207ENST00000509102 YIPF3Q9GZM5 350 aa15.62■□□□□ 0.09
UBE3D-207ENST00000509102 ABCB9Q9NP78 766 aa15.62■□□□□ 0.09
UBE3D-207ENST00000509102 MMP26Q9NRE1 261 aa15.62■□□□□ 0.09
UBE3D-207ENST00000509102 C1orf123Q9NWV4 160 aa15.62■□□□□ 0.09
UBE3D-207ENST00000509102 TRAV38-1A0A0B4J264 116 aa15.61■□□□□ 0.09
UBE3D-207ENST00000509102 ANXA2P2A6NMY6 339 aa15.61■□□□□ 0.09
UBE3D-207ENST00000509102 TRAPPC2LH3BP13 241 aa15.61■□□□□ 0.09
UBE3D-207ENST00000509102 PHYHO14832 338 aa15.61■□□□□ 0.09
UBE3D-207ENST00000509102 NDUFA2O43678 99 aa15.61■□□□□ 0.09
UBE3D-207ENST00000509102 GSK3AP49840 483 aa15.61■□□□□ 0.09
UBE3D-207ENST00000509102 PSMA6P60900 246 aaKnown RBP15.61■□□□□ 0.09
UBE3D-207ENST00000509102 FAM201AQ5SY85 155 aa15.61■□□□□ 0.09
UBE3D-207ENST00000509102 DEFB108BQ8NET1 73 aa15.61■□□□□ 0.09
UBE3D-207ENST00000509102 BBS1Q8NFJ9 593 aa15.61■□□□□ 0.09
UBE3D-207ENST00000509102 DVL3Q92997 716 aaPredicted RBP15.61■□□□□ 0.09
UBE3D-207ENST00000509102 PAPOLGQ9BWT3 736 aaKnown RBP15.61■□□□□ 0.09
UBE3D-207ENST00000509102 MROQ9BYG7 248 aa15.61■□□□□ 0.09
UBE3D-207ENST00000509102 OPN4Q9UHM6 478 aa15.61■□□□□ 0.09
UBE3D-207ENST00000509102 hCG_38984A0A1B0GV85 526 aa15.6■□□□□ 0.09
UBE3D-207ENST00000509102 TRIM77I1YAP6 450 aa15.6■□□□□ 0.09
UBE3D-207ENST00000509102 LGALS8O00214 317 aa15.6■□□□□ 0.09
UBE3D-207ENST00000509102 RGS9O75916 674 aaPredicted RBP15.6■□□□□ 0.09
UBE3D-207ENST00000509102 SLC2A5P22732 501 aa15.6■□□□□ 0.09
UBE3D-207ENST00000509102 NPY4RP50391 375 aa15.6■□□□□ 0.09
UBE3D-207ENST00000509102 HILS1P60008 231 aa15.6■□□□□ 0.09
UBE3D-207ENST00000509102 IL5RAQ01344 420 aa15.6■□□□□ 0.09
UBE3D-207ENST00000509102 DEGS2Q6QHC5 323 aa15.6■□□□□ 0.09
UBE3D-207ENST00000509102 PRSS45Q7RTY3 260 aa15.6■□□□□ 0.09
UBE3D-207ENST00000509102 ASB17Q8WXJ9 295 aa15.6■□□□□ 0.09
UBE3D-207ENST00000509102 TEAD3Q99594 435 aa15.6■□□□□ 0.09
UBE3D-207ENST00000509102 MICU1Q9BPX6 476 aa15.6■□□□□ 0.09
UBE3D-207ENST00000509102 ERVK-18Q9QC07 812 aa15.6■□□□□ 0.09
UBE3D-207ENST00000509102 NUP50Q9UKX7 468 aa15.6■□□□□ 0.09
UBE3D-207ENST00000509102 LRP12Q9Y561 859 aa15.6■□□□□ 0.09
UBE3D-207ENST00000509102 OOEPA6NGQ2 149 aa15.59■□□□□ 0.09
UBE3D-207ENST00000509102 SLC22A31A6NKX4 558 aa15.59■□□□□ 0.09
UBE3D-207ENST00000509102 C3orf80F5H4A9 247 aa15.59■□□□□ 0.09
UBE3D-207ENST00000509102 VENTXO95231 258 aa15.59■□□□□ 0.09
UBE3D-207ENST00000509102 ALOX5APP20292 161 aa15.59■□□□□ 0.09
UBE3D-207ENST00000509102 ANOS1P23352 680 aa15.59■□□□□ 0.09
UBE3D-207ENST00000509102 CD276Q5ZPR3 534 aa15.59■□□□□ 0.09
UBE3D-207ENST00000509102 SFRP4Q6FHJ7 346 aaPredicted RBP15.59■□□□□ 0.09
UBE3D-207ENST00000509102 FAM81AQ8TBF8 368 aa15.59■□□□□ 0.09
UBE3D-207ENST00000509102 RAB40AQ8WXH6 277 aa15.59■□□□□ 0.09
UBE3D-207ENST00000509102 TECTBQ96PL2 329 aa15.59■□□□□ 0.09
UBE3D-207ENST00000509102 CNN2Q99439 309 aaKnown RBP15.59■□□□□ 0.09
UBE3D-207ENST00000509102 SLC6A7Q99884 636 aa15.59■□□□□ 0.09
UBE3D-207ENST00000509102 MPC1Q9Y5U8 109 aa15.59■□□□□ 0.09
UBE3D-207ENST00000509102 IGHV2-70DA0A0C4DH43 119 aa15.58■□□□□ 0.08
UBE3D-207ENST00000509102 ACOD1A6NK06 481 aa15.58■□□□□ 0.08
UBE3D-207ENST00000509102 ZNF254O75437 659 aa15.58■□□□□ 0.08
UBE3D-207ENST00000509102 MRPL3P09001 348 aaKnown RBP15.58■□□□□ 0.08
UBE3D-207ENST00000509102 PPIAL4GP0DN37 164 aa15.58■□□□□ 0.08
UBE3D-207ENST00000509102 ACTR3P61158 418 aa15.58■□□□□ 0.08
UBE3D-207ENST00000509102 ACTG1P63261 375 aa15.58■□□□□ 0.08
UBE3D-207ENST00000509102 ZNF829Q3KNS6 432 aaPredicted RBP15.58■□□□□ 0.08
UBE3D-207ENST00000509102 COMMD2Q86X83 199 aa15.58■□□□□ 0.08
UBE3D-207ENST00000509102 C19orf18Q8NEA5 215 aa15.58■□□□□ 0.08
UBE3D-207ENST00000509102 SEMA6DQ8NFY4 1073 aa15.58■□□□□ 0.08
UBE3D-207ENST00000509102 ITFG2Q969R8 447 aa15.58■□□□□ 0.08
UBE3D-207ENST00000509102 DUS3LQ96G46 650 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms