RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 ABRACLQ9P1F3 81 aa9.58□□□□□ -0.88
PROM1-207ENST00000508167 HMX3A6NHT5 357 aa9.58□□□□□ -0.88
PROM1-207ENST00000508167 KCTD20Q7Z5Y7 419 aa9.58□□□□□ -0.88
PROM1-207ENST00000508167 CATSPERDQ86XM0 798 aa9.58□□□□□ -0.88
PROM1-207ENST00000508167 PIAS4Q8N2W9 510 aaPredicted RBP9.58□□□□□ -0.88
PROM1-207ENST00000508167 SPTSSAQ969W0 71 aa9.58□□□□□ -0.88
PROM1-207ENST00000508167 THAP7Q9BT49 309 aaPredicted RBP9.58□□□□□ -0.88
PROM1-207ENST00000508167 AUNIPQ9H7T9 357 aa9.58□□□□□ -0.88
PROM1-207ENST00000508167 ALG5Q9Y673 324 aa9.58□□□□□ -0.88
PROM1-207ENST00000508167 H3BSH0 61 aa9.58□□□□□ -0.88
PROM1-207ENST00000508167 LCATP04180 440 aa9.58□□□□□ -0.88
PROM1-207ENST00000508167 DEFA1P59665 94 aa9.58□□□□□ -0.88
PROM1-207ENST00000508167 DEFA3P59666 94 aa9.58□□□□□ -0.88
PROM1-207ENST00000508167 LSM6P62312 80 aaKnown RBP9.58□□□□□ -0.88
PROM1-207ENST00000508167 LINC01560Q8TB33 94 aa9.58□□□□□ -0.88
PROM1-207ENST00000508167 MNTQ99583 582 aa9.58□□□□□ -0.88
PROM1-207ENST00000508167 EIF3KQ9UBQ5 218 aaKnown RBP9.58□□□□□ -0.88
PROM1-207ENST00000508167 NBEAQ8NFP9 2946 aa9.58□□□□□ -0.88
PROM1-207ENST00000508167 OR5H1A6NKK0 313 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 RGS13O14921 159 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 CCL2P13500 99 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 GCDHQ92947 438 aaPredicted RBP9.57□□□□□ -0.88
PROM1-207ENST00000508167 RNASE6Q93091 150 aaKnown RBP9.57□□□□□ -0.88
PROM1-207ENST00000508167 FYTTD1Q96QD9 318 aaKnown RBP9.57□□□□□ -0.88
PROM1-207ENST00000508167 GHITMQ9H3K2 345 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 PNRC2Q9NPJ4 139 aaKnown RBP9.57□□□□□ -0.88
PROM1-207ENST00000508167 FBXL3Q9UKT7 428 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 KALRNO60229 2985 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 C5orf49A4QMS7 147 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 RPL36A-HNRNPH2H7BZ11 118 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 HRGP04196 525 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 CST2P09228 141 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 SLC2A1P11166 492 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 GABRA6Q16445 453 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 MDP1Q86V88 176 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 CCDC36Q8IYA8 594 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 ASB17Q8WXJ9 295 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 FOXJ3Q9UPW0 622 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 ABCA4P78363 2273 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 C7orf66A4D0T2 115 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 SERPINA3P01011 423 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 CGAP01215 116 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 PSMB1P20618 241 aaKnown RBP9.57□□□□□ -0.88
PROM1-207ENST00000508167 TATDN3Q17R31 274 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 Q499Y3 187 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 UBE2NLQ5JXB2 153 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 MZT2AQ6P582 158 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 VHLLQ6RSH7 139 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 PAMR1Q6UXH9 720 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 DNAAF1Q8NEP3 725 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 BCL2L2Q92843 193 aaPredicted RBP9.57□□□□□ -0.88
PROM1-207ENST00000508167 AMDHD2Q9Y303 409 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 ICE1Q9Y2F5 2266 aa9.57□□□□□ -0.88
PROM1-207ENST00000508167 FASNP49327 2511 aaKnown RBP9.56□□□□□ -0.88
PROM1-207ENST00000508167 ZNF878C9JN71 531 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 LDLRAD4O15165 306 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 LMX1BO60663 402 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 CCR9P51686 369 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 ELFN2Q5R3F8 820 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 ZNF529Q6P280 563 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 SMIM4Q8WVI0 70 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 FBXO17Q96EF6 278 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 LRP12Q9Y561 859 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 A8MV72 311 aaPredicted RBP9.56□□□□□ -0.88
PROM1-207ENST00000508167 PRSS44E7EML9 344 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 CRYAAP02489 173 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 MYL9P24844 172 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 EFNB2P52799 333 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 GUSBP1Q15486 140 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 TBC1D28Q2M2D7 210 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 HSD17B12Q53GQ0 312 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 LAMTOR1Q6IAA8 161 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 PRSS45Q7RTY3 260 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 PGAM5Q96HS1 289 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 LIN7BQ9HAP6 207 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 NLKQ9UBE8 527 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 NUFIP1Q9UHK0 495 aaKnown RBP9.56□□□□□ -0.88
PROM1-207ENST00000508167 PRR14LQ5THK1 2151 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 CADP27708 2225 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 TMEM269A0A1B0GVZ9 245 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 RCVRNP35243 200 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 PSG4Q00888 419 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 DPPA2Q7Z7J5 298 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 OR1F12Q8NHA8 337 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 OR2H1Q9GZK4 316 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 HDHD2Q9H0R4 259 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 RANGRFQ9HD47 186 aaPredicted RBP9.56□□□□□ -0.88
PROM1-207ENST00000508167 SLC17A5Q9NRA2 495 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 DDX28Q9NUL7 540 aaKnown RBP9.56□□□□□ -0.88
PROM1-207ENST00000508167 SLC22A13Q9Y226 551 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 LHFPL6Q9Y693 200 aa9.56□□□□□ -0.88
PROM1-207ENST00000508167 LOC390937A0A1W2PQ73 354 aa9.55□□□□□ -0.88
PROM1-207ENST00000508167 TIMM23BQ5SRD1 257 aa9.55□□□□□ -0.88
PROM1-207ENST00000508167 PYHIN1Q6K0P9 492 aa9.55□□□□□ -0.88
PROM1-207ENST00000508167 CFAP77Q6ZQR2 320 aa9.55□□□□□ -0.88
PROM1-207ENST00000508167 ZNF679Q8IYX0 411 aa9.55□□□□□ -0.88
PROM1-207ENST00000508167 TCTE3Q8IZS6 198 aa9.55□□□□□ -0.88
PROM1-207ENST00000508167 KCNK15Q9H427 330 aa9.55□□□□□ -0.88
PROM1-207ENST00000508167 FAM206AQ9NX38 181 aa9.55□□□□□ -0.88
PROM1-207ENST00000508167 PKDREJQ9NTG1 2253 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms