RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ANXA2P2A6NMY6 339 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 GPR37O15354 613 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 PRODHO43272 600 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 TBX1O43435 398 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 ADAM20O43506 726 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 SPRY1O43609 319 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 GYPBP06028 91 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 GNALP38405 381 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 GYS2P54840 703 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 IL5RAQ01344 420 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 MS4A2Q01362 244 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 PDCD1Q15116 288 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 FAM201AQ5SY85 155 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 TEX36Q5VZQ5 186 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 SLC16A9Q7RTY1 509 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 DPY19L4Q7Z388 723 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 ERI1Q8IV48 349 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 TMEM86BQ8N661 226 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 ZNRF4Q8WWF5 429 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 DNAJC9Q8WXX5 260 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 ZDHHC16Q969W1 377 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 C12orf43Q96C57 262 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 REEP6Q96HR9 211 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 FAM71F1Q96KD3 344 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 FEVQ99581 238 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 MICU1Q9BPX6 476 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 ABHD6Q9BV23 337 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 CHID1Q9BWS9 393 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 C1orf123Q9NWV4 160 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 MPC1Q9Y5U8 109 aa12.01□□□□□ -0.49
HMGCS1-203ENST00000507004 ZNF879B4DU55 563 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 PRR23D1E9PI22 279 aaPredicted RBP12□□□□□ -0.49
HMGCS1-203ENST00000507004 GRPP07492 148 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 H2BFMP0C1H6 154 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 PRR23D2P0DMB1 279 aaPredicted RBP12□□□□□ -0.49
HMGCS1-203ENST00000507004 IGHV4-38-2P0DP08 117 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 ANXA8P13928 327 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 CFHR2P36980 270 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 PRSS12P56730 875 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 RPL15P61313 204 aaKnown RBP12□□□□□ -0.49
HMGCS1-203ENST00000507004 FGF12P61328 243 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 FAM3AP98173 230 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 PPP1R8Q12972 351 aaKnown RBP12□□□□□ -0.49
HMGCS1-203ENST00000507004 MICBQ29980 383 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 DNAL1Q4LDG9 190 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 SLC35D3Q5M8T2 416 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 METTL11BQ5VVY1 283 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 C16orf87Q6PH81 154 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 LYPD4Q6UWN0 246 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 LYPD2Q6UXB3 125 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 SLC36A1Q7Z2H8 476 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 BCL6BQ8N143 479 aaPredicted RBP12□□□□□ -0.49
HMGCS1-203ENST00000507004 ZNF48Q96MX3 618 aaPredicted RBP12□□□□□ -0.49
HMGCS1-203ENST00000507004 TAS2R1Q9NYW7 299 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 NBEAL1Q6ZS30 2694 aa12□□□□□ -0.49
HMGCS1-203ENST00000507004 hCG_38984A0A1B0GV85 526 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 TMEM210A6NLX4 147 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 C3orf80F5H4A9 247 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 TNFRSF13BO14836 293 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 E2F6O75461 281 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 LHBP01229 141 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 LYNP07948 512 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 CLUP10909 449 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 SLC2A1P11166 492 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 OSMP13725 252 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 OPRL1P41146 370 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 HNRNPA0Q13151 305 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 SLC9A3R2Q15599 337 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 TIGD4Q8IY51 512 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 GALNT4Q8N4A0 578 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 GCSAMQ8N6F7 178 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 BOLLQ8N9W6 283 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 OTOSQ8NHW6 89 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 GATAD2BQ8WXI9 593 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 OTULINQ96BN8 352 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 SGK3Q96BR1 496 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 CCDC124Q96CT7 223 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 PGAM5Q96HS1 289 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 NIPSNAP1Q9BPW8 284 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 DNTTIP1Q9H147 329 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 SLITRK2Q9H156 845 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 ZNF696Q9H7X3 374 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 VNN3Q9NY84 501 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 N6AMT1Q9Y5N5 214 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 POMT1Q9Y6A1 747 aa11.99□□□□□ -0.49
HMGCS1-203ENST00000507004 ACOD1A6NK06 481 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 SRRM5B3KS81 715 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 C22orf46C9J442 243 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 ACOT8O14734 319 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 TOX4O94842 621 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 CRYBA1P05813 215 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 ZNF121P58317 390 aaPredicted RBP11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 DBPQ10586 325 aaPredicted RBP11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 SFRP4Q6FHJ7 346 aaPredicted RBP11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 DEGS2Q6QHC5 323 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 FAM57BQ71RH2 274 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 PRSS45Q7RTY3 260 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 ADGRG5Q8IZF4 528 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 PAPD5Q8NDF8 572 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms