RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 BPIFCQ8NFQ6 507 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 OR56A4Q8NGH8 313 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 OR1L1Q8NH94 360 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 AGR3Q8TD06 166 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 GLYATL2Q8WU03 294 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 CPNE4Q96A23 557 aaPredicted RBP1.3□□□□□ -2.2
GYPB-207ENST00000506679 RPEQ96AT9 228 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 HAUS1Q96CS2 278 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 BPIFA3Q9BQP9 254 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 UCK2Q9BZX2 261 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 ELOVL6Q9H5J4 265 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 PLEKHF2Q9H8W4 249 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 LINC00574Q9H8X3 128 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 CCNB1IP1Q9NPC3 277 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 ACP6Q9NPH0 428 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 RRAGDQ9NQL2 400 aaPredicted RBP1.3□□□□□ -2.2
GYPB-207ENST00000506679 AGPAT4Q9NRZ5 378 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 SLC39A1Q9NY26 324 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 RCL1Q9Y2P8 373 aaKnown RBP1.3□□□□□ -2.2
GYPB-207ENST00000506679 KIAA1671Q9BY89 1806 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 WDR19Q8NEZ3 1342 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 INSRP06213 1382 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 LOXHD1Q8IVV2 1947 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 PLEKHG2Q9H7P9 1386 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 ZSWIM8A7E2V4 1837 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 NCF1BA6NI72 391 aaPredicted RBP1.29□□□□□ -2.2
GYPB-207ENST00000506679 NCF1CA8MVU1 366 aaPredicted RBP1.29□□□□□ -2.2
GYPB-207ENST00000506679 GOLGA8TH3BQL2 631 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 NME4O00746 187 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 POLR1CO15160 346 aaPredicted RBP1.29□□□□□ -2.2
GYPB-207ENST00000506679 ERI3O43414 337 aaKnown RBP1.29□□□□□ -2.2
GYPB-207ENST00000506679 CHMP2AO43633 222 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 DNAJB6O75190 326 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 CBR3O75828 277 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 CCNB2O95067 398 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 IGLV2-8P01709 118 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 HLA-HP01893 362 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 MT-ND4P03905 459 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 GLAP06280 429 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 STAG3L3P0CL85 134 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 TALDO1P37837 337 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 CCT6AP40227 531 aaKnown RBP1.29□□□□□ -2.2
GYPB-207ENST00000506679 PPICP45877 212 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 IDH2P48735 452 aaKnown RBP1.29□□□□□ -2.2
GYPB-207ENST00000506679 CLDN18P56856 261 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 TAS2R46P59540 309 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 ELF3P78545 371 aaPredicted RBP1.29□□□□□ -2.2
GYPB-207ENST00000506679 RAD51Q06609 339 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 TAF9Q16594 264 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 ZNF829Q3KNS6 432 aaPredicted RBP1.29□□□□□ -2.2
GYPB-207ENST00000506679 SLC25A35Q3KQZ1 300 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 PLCXD3Q63HM9 321 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 CLEC2AQ6UVW9 174 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 TMEM136Q6ZRR5 245 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 HORMAD1Q86X24 394 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 APRG1Q8IVJ8 170 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 OFCC1Q8IZS5 231 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 SNX31Q8N9S9 440 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 OR5AR1Q8NGP9 310 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 SGTBQ96EQ0 304 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 C9orf72Q96LT7 481 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 OPALINQ96PE5 141 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 CDX2Q99626 313 aaPredicted RBP1.29□□□□□ -2.2
GYPB-207ENST00000506679 RHOXF2Q9BQY4 288 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 ANGPTL4Q9BY76 406 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 SLC7A5P2Q9GIP4 190 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 RGS18Q9NS28 235 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 TBC1D24Q9ULP9 559 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 CARHSP1Q9Y2V2 147 aaKnown RBP1.29□□□□□ -2.2
GYPB-207ENST00000506679 PRR14LQ5THK1 2151 aa1.29□□□□□ -2.2
GYPB-207ENST00000506679 TRIOBPQ9H2D6 2365 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 A0A1B0GTQ1 180 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 GOLGA6L7A0A1B0GV03 622 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 A0A1W2PRD5 423 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 SUPT3HB4E1H0 165 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 H0YC42 278 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 TRDMT1O14717 391 aaKnown RBP1.28□□□□□ -2.2
GYPB-207ENST00000506679 CLTAP09496 248 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 TACSTD2P09758 323 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 LGALS3P17931 250 aaKnown RBP1.28□□□□□ -2.2
GYPB-207ENST00000506679 MPV17P39210 176 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 MYCNOSP40205 109 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 NBL1P41271 181 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 CMC4P56277 68 aaPredicted RBP1.28□□□□□ -2.2
GYPB-207ENST00000506679 RPS11P62280 158 aaKnown RBP eCLIP1.28□□□□□ -2.2
GYPB-207ENST00000506679 ITIH4Q14624 930 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 WDR43Q15061 677 aaKnown RBP eCLIP1.28□□□□□ -2.2
GYPB-207ENST00000506679 KLHL40Q2TBA0 621 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 SPIN3Q5JUX0 258 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 PIP5KL1Q5T9C9 394 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 PRSS54Q6PEW0 395 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 DEGS2Q6QHC5 323 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 ERO1BQ86YB8 467 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 C8orf31Q8N9H6 132 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 TMEM104Q8NE00 496 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 GPX8Q8TED1 209 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 ZCCHC13Q8WW36 166 aaKnown RBP1.28□□□□□ -2.2
GYPB-207ENST00000506679 GHSRQ92847 366 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 PEX13Q92968 403 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 ISG20Q96AZ6 181 aaKnown RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms