RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 BAZ2AQ9UIF9 1905 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 CEACAM18A8MTB9 384 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 C16orf90A8MZG2 172 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 ERI3O43414 337 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 SLC16A7O60669 478 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 TDP2O95551 362 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 RAB5AP20339 215 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 IRF8Q02556 426 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 IL18Q14116 193 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 LUZP6Q538Z0 58 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 KLHL12Q53G59 568 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 WDR82Q6UXN9 313 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 ERO1BQ86YB8 467 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 KCNS1Q96KK3 526 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 ZFP3Q96NJ6 502 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 GPR82Q96P67 336 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 GPR21Q99679 349 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 KCNS3Q9BQ31 491 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 MARVELD1Q9BSK0 173 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 FRMD8P1Q9BZ68 369 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 LHX5Q9H2C1 402 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 AUNIPQ9H7T9 357 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 VPS37BQ9H9H4 285 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 LYRM4Q9HD34 91 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 RBFOX1Q9NWB1 397 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 MYEF2Q9P2K5 600 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 YARS2Q9Y2Z4 477 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 CAB39Q9Y376 341 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 ADGRL1O94910 1474 aa1.99□□□□□ -2.09
TOPBP1-204ENST00000505804 SHANK1Q9Y566 2161 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 MANBAO00462 879 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 LHBP01229 141 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 IGLV2-8P01709 118 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 OR8G3PP0DMU2 310 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 HSPD1P10809 573 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 NTF3P20783 257 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 GALP22466 123 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 PRKACBP22694 351 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 RPS5P46782 204 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 AP1S2P56377 157 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 IFITM3Q01628 133 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 IL15RAQ13261 267 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 TFDP2Q14188 446 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 SPINT4Q6UDR6 99 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 CASP12Q6UXS9 341 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 BRD3OSQ6XYD6 125 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 Q6ZSR6 202 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 UNC93AQ86WB7 457 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 ZNF547Q8IVP9 402 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 STK40Q8N2I9 435 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 DRAM1Q8N682 238 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 C8orf31Q8N9H6 132 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 TMEM104Q8NE00 496 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 OR5M1Q8NGP8 315 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 OR1L1Q8NH94 360 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 KLF14Q8TD94 323 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 DCAKDQ8WVC6 231 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 CDS1Q92903 461 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 JSRP1Q96MG2 331 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 CSNK1G1Q9HCP0 422 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 MRPS30Q9NP92 439 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 LRRC42Q9Y546 428 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 KIAA1671Q9BY89 1806 aa1.98□□□□□ -2.09
TOPBP1-204ENST00000505804 A0A0A6YYD5 115 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 VGLL3A8MV65 326 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 M0R1X1 148 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 CNMDO75829 334 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 GATBO75879 557 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 TRBV12-3P01733 135 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 CD28P10747 220 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 PCK1P35558 622 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 RAD51Q06609 339 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 NAB1Q13506 487 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 GABRA6Q16445 453 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 RPEL1Q2QD12 228 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 RWDD4Q6NW29 188 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 MED27Q6P2C8 311 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 PRSS54Q6PEW0 395 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 CLEC2AQ6UVW9 174 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 TMPRSS11AQ6ZMR5 421 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 RAB43Q86YS6 212 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 APRG1Q8IVJ8 170 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 MICU2Q8IYU8 434 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 CNPY4Q8N129 248 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 CA5BP1Q8WTZ4 195 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 OPALINQ96PE5 141 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 LINC00574Q9H8X3 128 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 PXMP2Q9NR77 195 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 MCUBQ9NWR8 336 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 C2orf16Q68DN1 1984 aa1.97□□□□□ -2.09
TOPBP1-204ENST00000505804 THADAQ6YHU6 1953 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 IGKV3D-11A0A0A0MRZ8 115 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 TRAV25A0A0B4J276 109 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 A0A1W2PRD5 423 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 LRRIQ4A6NIV6 560 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 MFNGO00587 321 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 CASQ2O14958 399 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 ZBTB5O15062 677 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 XRCC2O43543 280 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 CTAG2O75638 210 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms