RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 DEFB129Q9H1M3 183 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 SLC38A10Q9HBR0 1119 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 FBXO6Q9NRD1 293 aaPredicted RBP1.89□□□□□ -2.11
CHD1-203ENST00000505657 DDX19AQ9NUU7 478 aaKnown RBP1.89□□□□□ -2.11
CHD1-203ENST00000505657 ADA2Q9NZK5 511 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 BAZ2AQ9UIF9 1905 aaKnown RBP1.89□□□□□ -2.11
CHD1-203ENST00000505657 ADGRA3Q8IWK6 1321 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 PCDH11XQ9BZA7 1347 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 MIA3Q5JRA6 1907 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 DYSFO75923 2080 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 IGKV1-8A0A0C4DH67 115 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 C5orf63A6NC05 138 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 SLC22A20A6NK97 555 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 H0YJW9 148 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 HLA-DQA1P01909 254 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 OR8U9P0C7N5 309 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 PTNP21246 168 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 NUP62P37198 522 aaPredicted RBP1.88□□□□□ -2.11
CHD1-203ENST00000505657 RBM34P42696 430 aaKnown RBP1.88□□□□□ -2.11
CHD1-203ENST00000505657 FABP6P51161 128 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 NDUFA8P51970 172 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 TAS2R46P59540 309 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 CYP24A1Q07973 514 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 ZNF616Q08AN1 781 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 RBMY1FQ15415 496 aaKnown RBP1.88□□□□□ -2.11
CHD1-203ENST00000505657 ZNF829Q3KNS6 432 aaPredicted RBP1.88□□□□□ -2.11
CHD1-203ENST00000505657 ULK3Q6PHR2 472 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 SLC16A13Q7RTY0 426 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 NKAIN4Q8IVV8 208 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 CDKL3Q8IVW4 592 aaPredicted RBP1.88□□□□□ -2.11
CHD1-203ENST00000505657 PDCL2Q8N4E4 241 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 SGTBQ96EQ0 304 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 GALNT14Q96FL9 552 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 TMEM27Q9HBJ8 222 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 CD209Q9NNX6 404 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 MYOZ1Q9NP98 299 aaPredicted RBP1.88□□□□□ -2.11
CHD1-203ENST00000505657 SLC17A7Q9P2U7 560 aa1.88□□□□□ -2.11
CHD1-203ENST00000505657 IGHV1OR15-9A0A0B4J2B8 117 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 A0A0J9YXV3 536 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 A0A1B0GUH1 482 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 HACD1B0YJ81 288 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 ANKRD65E5RJM6 399 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 LGALS9O00182 355 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 ERI3O43414 337 aaKnown RBP1.87□□□□□ -2.11
CHD1-203ENST00000505657 PTTG1O95997 202 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 IL4P05112 153 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 CPN2P22792 545 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 BMI1P35226 326 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 GGT2P36268 569 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 YWHAEP62258 255 aaKnown RBP1.87□□□□□ -2.11
CHD1-203ENST00000505657 PAFAH1B2P68402 229 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 PRR3P79522 188 aaKnown RBP1.87□□□□□ -2.11
CHD1-203ENST00000505657 XIAPP98170 497 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 TFDP2Q14188 446 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 C5orf64Q2M2E5 130 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 HNRNPA1L2Q32P51 320 aaKnown RBP1.87□□□□□ -2.11
CHD1-203ENST00000505657 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 NKAIN1Q4KMZ8 207 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 TPRG1LQ5T0D9 272 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 RWDD4Q6NW29 188 aaKnown RBP1.87□□□□□ -2.11
CHD1-203ENST00000505657 WDR82Q6UXN9 313 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 LINC00336Q6ZUF6 198 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 ASCC1Q8N9N2 400 aaKnown RBP1.87□□□□□ -2.11
CHD1-203ENST00000505657 LINC00304Q8N9R0 145 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 GATSQ8NAP1 163 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 C17orf50Q8WW18 174 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 BAALCQ8WXS3 180 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 TFGQ92734 400 aaPredicted RBP1.87□□□□□ -2.11
CHD1-203ENST00000505657 RNF157Q96PX1 679 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 SIKE1Q9BRV8 207 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 CHID1Q9BWS9 393 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.87□□□□□ -2.11
CHD1-203ENST00000505657 GAL3ST2Q9H3Q3 398 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 TDRD3Q9H7E2 651 aaKnown RBP1.87□□□□□ -2.11
CHD1-203ENST00000505657 MED4Q9NPJ6 270 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 FBXO8Q9NRD0 319 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 RGS18Q9NS28 235 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 IFNKQ9P0W0 207 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 FLVCR2Q9UPI3 526 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 COMMD3-BMI1R4GMX3 469 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 MROH5Q6ZUA9 1318 aa1.87□□□□□ -2.11
CHD1-203ENST00000505657 PALLDQ8WX93 1383 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 TICRRQ7Z2Z1 1910 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 FHOD3Q2V2M9 1422 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 TRAV6A0A075B6T7 132 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 TRAV19A0A0A6YYK7 116 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 A6NDN8 102 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 CENPXA8MT69 81 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 NDUFC2-KCTD14E9PQ53 114 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 H3BN98 237 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 CHMP2AO43633 222 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 KLK1P06870 262 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 CTSLP07711 333 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 RAB5AP20339 215 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 PFN2P35080 140 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 PPICP45877 212 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 AP1S2P56377 157 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 PIGHQ14442 188 aaPredicted RBP1.86□□□□□ -2.11
CHD1-203ENST00000505657 KIR2DS1Q14954 304 aa1.86□□□□□ -2.11
CHD1-203ENST00000505657 HSP90AA4PQ58FG1 418 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms