RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	SAMHD1	Q9Y3Z3	626 aa	Known RBP	13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	LYVE1	Q9Y5Y7	322 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	COMMD3-BMI1	R4GMX3	469 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066		H3BN98	237 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	GNGT2	O14610	69 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	TIMM23	O14925	209 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	GPR37	O15354	613 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	NDUFB3	O43676	98 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	MUC1	P15941	1255 aa	Predicted RBP	13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	MDK	P21741	143 aa	Predicted RBP	13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	CX3CR1	P49238	355 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	HMGA2	P52926	109 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	SLC25A1	P53007	311 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	GK3P	Q14409	553 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	TUSC1	Q2TAM9	212 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	GFOD2	Q3B7J2	385 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	BRICD5	Q6PL45	260 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	CYP2R1	Q6VVX0	501 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066		Q6YL49	198 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	BTN2A1	Q7KYR7	527 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	DHFR2	Q86XF0	187 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	PAPD5	Q8NDF8	572 aa	Known RBP	13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	OR9Q2	Q8NGE9	314 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	PGAM5	Q96HS1	289 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	INTS14	Q96SY0	518 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	PAPOLG	Q9BWT3	736 aa	Known RBP	13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	RGCC	Q9H4X1	137 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	MAGIX	Q9H6Y5	334 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	CNTD2	Q9H8S5	307 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	ONECUT1	Q9UBC0	465 aa		13.61	□□□□□ -0.23
DDR1-256	ENST00000505066	IGHV1-69D	A0A0B4J2H0	117 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	NKX6-3	A6NJ46	265 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	C22orf46	C9J442	243 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	DVL1	O14640	695 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	TNFRSF13B	O14836	293 aa	Predicted RBP	13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	WIPF1	O43516	503 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	PTBP3	O95758	552 aa	Known RBP	13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	PAH	P00439	452 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	GAST	P01350	101 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	IGHV1-69	P01742	117 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	H2BFM	P0C1H6	154 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	SLC2A1	P11166	492 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	SPI1	P17947	270 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	RPS27	P42677	84 aa	Known RBP	13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	ARF6	P62330	175 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	GUCA2A	Q02747	115 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	BLMH	Q13867	455 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	CRMP1	Q14194	572 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	LRRC10	Q5BKY1	277 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	TEX30	Q5JUR7	227 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	ZNF841	Q6ZN19	808 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	KCTD8	Q6ZWB6	473 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	ERI1	Q8IV48	349 aa	Known RBP	13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	OR6N2	Q8NGY6	317 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	LRRC29	Q8WV35	223 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	DYRK2	Q92630	601 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	LHX4	Q969G2	390 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	UBE2F	Q969M7	185 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	REEP6	Q96HR9	211 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	C1orf147	Q96MC9	270 aa	Predicted RBP	13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	RTL8A	Q9BWD3	113 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	ZNF556	Q9HAH1	456 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066	KPTN	Q9Y664	436 aa		13.6	□□□□□ -0.23
DDR1-256	ENST00000505066		A0A1B0GVI7	797 aa		13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	MDFIC2	A0A1B0GVS7	189 aa		13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	SFTPB	P07988	381 aa		13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	POU1F1	P28069	291 aa		13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	GSTT1	P30711	240 aa		13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	OTX1	P32242	354 aa	Predicted RBP	13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	MICA	Q29983	383 aa		13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	OLFML2A	Q68BL7	652 aa		13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	OR2T5	Q6IEZ7	315 aa		13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	GDPGP1	Q6ZNW5	385 aa		13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	FAM57B	Q71RH2	274 aa		13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	TIGD4	Q8IY51	512 aa		13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	ZNF511	Q8NB15	262 aa		13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	OR2T29	Q8NH02	315 aa		13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	NPRL2	Q8WTW4	380 aa		13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	C12orf43	Q96C57	262 aa	Known RBP	13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	PRDM13	Q9H4Q3	707 aa		13.59	□□□□□ -0.23
DDR1-256	ENST00000505066	TANC2	Q9HCD6	1990 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	CENPVL3	A0A0U1RRI6	287 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	DHRS12	A0PJE2	317 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	CLPSL1	A2RUU4	121 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	NDUFA7	O95182	113 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	SOX14	O95416	240 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	GYPB	P06028	91 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	MELTF	P08582	738 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	FBP1	P09467	338 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	HOXB6	P17509	224 aa	Known RBP	13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	GNGT1	P63211	74 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	CDON	Q4KMG0	1287 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	RUSC1-AS1	Q66K80	236 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	ZNF826P	Q6ZT77	177 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	RHOU	Q7L0Q8	258 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	SLC16A9	Q7RTY1	509 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	KIR3DL3	Q8N743	410 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	FAM81A	Q8TBF8	368 aa		13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	DACT3	Q96B18	629 aa	Predicted RBP	13.58	□□□□□ -0.24
DDR1-256	ENST00000505066	MED30	Q96HR3	178 aa		13.58	□□□□□ -0.24

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