RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 CDC42EP3Q9UKI2 254 aa8.37□□□□□ -1.07
NR1I3-220ENST00000505005 LRP12Q9Y561 859 aa8.37□□□□□ -1.07
NR1I3-220ENST00000505005 NPTNQ9Y639 398 aa8.37□□□□□ -1.07
NR1I3-220ENST00000505005 R4GMQ9 66 aa8.37□□□□□ -1.07
NR1I3-220ENST00000505005 PPIAL4EA0A075B759 164 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 PPIAL4CA0A0B4J2A2 164 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 ZNF816-ZNF321PA0A0X1KG74 233 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 CCDC182A6NF36 153 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 ZSCAN5BA6NJL1 495 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 A8MV72 311 aaPredicted RBP8.36□□□□□ -1.07
NR1I3-220ENST00000505005 E9PQ18 207 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 PPIAL4DF5H284 164 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 FOXH1O75593 365 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 PTBP3O95758 552 aaKnown RBP8.36□□□□□ -1.07
NR1I3-220ENST00000505005 CST4P01036 141 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 UBCP0CG48 685 aaKnown RBP8.36□□□□□ -1.07
NR1I3-220ENST00000505005 PPIAL4FP0DN26 164 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 MYF6P23409 242 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 COL8A2P25067 703 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 DCKP27707 260 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 MDH2P40926 338 aaKnown RBP8.36□□□□□ -1.07
NR1I3-220ENST00000505005 RPS27P42677 84 aaKnown RBP8.36□□□□□ -1.07
NR1I3-220ENST00000505005 NPY4RP50391 375 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 ADARB1P78563 741 aaKnown RBP8.36□□□□□ -1.07
NR1I3-220ENST00000505005 FAM3AP98173 230 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 HLXQ14774 488 aaPredicted RBP8.36□□□□□ -1.07
NR1I3-220ENST00000505005 OR8B8Q15620 311 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 MSMPQ1L6U9 139 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 ALKBH6Q3KRA9 238 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 ZIK1Q3SY52 487 aaPredicted RBP8.36□□□□□ -1.07
NR1I3-220ENST00000505005 GLYATL3Q5SZD4 288 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 BCL2L15Q5TBC7 163 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 TMEM244Q5VVB8 128 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 LRRN1Q6UXK5 716 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 TMPRSS11AQ6ZMR5 421 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 DOK3Q7L591 496 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 NLRC3Q7RTR2 1065 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 KRT74Q7RTS7 529 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 COMMD2Q86X83 199 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 ZCCHC24Q8N2G6 241 aaKnown RBP8.36□□□□□ -1.07
NR1I3-220ENST00000505005 SYS1Q8N2H4 156 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 YIPF7Q8N8F6 280 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 BBS1Q8NFJ9 593 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 SEMA6DQ8NFY4 1073 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 OR10H4Q8NGA5 316 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 OR51F2Q8NH61 342 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 SGK3Q96BR1 496 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 C1orf159Q96HA4 380 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 MEGF10Q96KG7 1140 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 DMRTB1Q96MA1 342 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 RTL8AQ9BWD3 113 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 YTHDF1Q9BYJ9 559 aaKnown RBP8.36□□□□□ -1.07
NR1I3-220ENST00000505005 MRPS18AQ9NVS2 196 aaKnown RBP8.36□□□□□ -1.07
NR1I3-220ENST00000505005 MIOXQ9UGB7 285 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 ENPP5Q9UJA9 477 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 EXOGQ9Y2C4 368 aaKnown RBP8.36□□□□□ -1.07
NR1I3-220ENST00000505005 N6AMT1Q9Y5N5 214 aa8.36□□□□□ -1.07
NR1I3-220ENST00000505005 CSMD1Q96PZ7 3565 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 TRAV38-1A0A0B4J264 116 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 TRAV20A0A0B4J274 112 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 A0A1B0GVI7 797 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 OR5B21A6NL26 309 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 J3QLI3 93 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 RP2O75695 350 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 GATBO75879 557 aaKnown RBP8.35□□□□□ -1.07
NR1I3-220ENST00000505005 DHRS3O75911 302 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 MRPL3P09001 348 aaKnown RBP8.35□□□□□ -1.07
NR1I3-220ENST00000505005 CCDC159P0C7I6 412 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 EPHA2P29317 976 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 GSK3AP49840 483 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 CCR9P51686 369 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 DVL1P1P54792 670 aaPredicted RBP8.35□□□□□ -1.07
NR1I3-220ENST00000505005 SNAI3Q3KNW1 292 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 SPATC1Q76KD6 591 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 PRSS45Q7RTY3 260 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 GLCCI1Q86VQ1 547 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 ELMOD2Q8IZ81 293 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 C8orf59Q8N0T1 100 aaPredicted RBP8.35□□□□□ -1.07
NR1I3-220ENST00000505005 OR5AS1Q8N127 324 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 OR5A2Q8NGI9 324 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 ZNF671Q8TAW3 534 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 THRSPQ92748 146 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 RNFT2Q96EX2 444 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 CPNE2Q96FN4 548 aaPredicted RBP8.35□□□□□ -1.07
NR1I3-220ENST00000505005 GAL3ST1Q99999 423 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 ADAT1Q9BUB4 502 aaKnown RBP8.35□□□□□ -1.07
NR1I3-220ENST00000505005 KRTAP3-3Q9BYR6 98 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 PBOV1Q9GZY1 135 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 GCM1Q9NP62 436 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 DNAJC27Q9NZQ0 273 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 RNF7Q9UBF6 113 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 OR52A1Q9UKL2 312 aa8.35□□□□□ -1.07
NR1I3-220ENST00000505005 MAP1AP78559 2803 aaPredicted RBP8.34□□□□□ -1.07
NR1I3-220ENST00000505005 LOC100289279A0A1B0GTE1 492 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 hCG_38984A0A1B0GV85 526 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 ISPDA4D126 451 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 MAGEA13PA6NCF6 341 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 EFCAB10A6NFE3 127 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 TMEM178BH3BS89 294 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms